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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08122.1
DDBJ      :             phage integrase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  156/915 : Eukaryota  0/199 : Viruses  2/175   --->[See Alignment]
d.163.1
:399 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   99->376 2crxB PDBj 6e-27 11.5 %
:RPS:SCOP  99->379 1p7dA  d.163.1.1 * 6e-25 14.6 %
:HMM:SCOP  203->379 1a0pA2 d.163.1.1 * 8.4e-28 28.7 %
:RPS:PFM   217->371 PF00589 * Phage_integrase 2e-06 30.0 %
:HMM:PFM   206->371 PF00589 * Phage_integrase 2.5e-22 26.4 159/173  
:BLT:SWISS 1->292 INTZ_ECOLI 6e-18 27.0 %
:BLT:SWISS 316->379 INTR_SACER 2e-06 35.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08122.1 GT:GENE ABF08122.1 GT:PRODUCT phage integrase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1359445..1360644 GB:FROM 1359445 GB:TO 1360644 GB:DIRECTION + GB:PRODUCT phage integrase GB:PROTEIN_ID ABF08122.1 GB:DB_XREF GI:93354033 InterPro:IPR002104 LENGTH 399 SQ:AASEQ MAKIKLTKTAVEAAQPQAKDVELRDTVVPGFLCKITPTGRRVFMLQYRTNSGQPRKPSLGLYGELTVEQARVKAQDWLAEVRRGGDPGGAKAEARKAPTMAELCKKFMEDYSKKRNKPSTQDGYQGVIDRNIIPLLGRKKVHDVKRPDIAGLMEKLAYKPTEANKTFGVLRKMFNLAEVWGYRPDGTNPCRHVPMYPPGKETRLIVDEEMVRIFRHLEKLEAEGLENYVIPLAIRLQFEFAARRSEICPLEWSWLDFENRRVVWPDSKVGGISKPMSEEAYRLLSTAPRREGCPYVLPSPNDSTKHLTFGEHYGGWCRVLKAAGVPHVGTHGIRHRSTTDIANSGVPTKVGMKLTGHKTVAMFMHYVHTEDKPVRDAAELVASRRQAITGARQLAEAAA GT:EXON 1|1-399:0| BL:SWS:NREP 2 BL:SWS:REP 1->292|INTZ_ECOLI|6e-18|27.0|285/402| BL:SWS:REP 316->379|INTR_SACER|2e-06|35.9|64/437| RP:PDB:NREP 1 RP:PDB:REP 99->376|2crxB|6e-27|11.5|278/309| RP:PFM:NREP 1 RP:PFM:REP 217->371|PF00589|2e-06|30.0|150/168|Phage_integrase| HM:PFM:NREP 1 HM:PFM:REP 206->371|PF00589|2.5e-22|26.4|159/173|Phage_integrase| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF00589|IPR002104| GO:PFM GO:0006310|"GO:DNA recombination"|PF00589|IPR002104| GO:PFM GO:0015074|"GO:DNA integration"|PF00589|IPR002104| RP:SCP:NREP 1 RP:SCP:REP 99->379|1p7dA|6e-25|14.6|268/280|d.163.1.1| HM:SCP:REP 203->379|1a0pA2|8.4e-28|28.7|171/182|d.163.1.1|1/1|DNA breaking-rejoining enzymes| OP:NHOMO 225 OP:NHOMOORG 158 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------1--------------------------------------------------------------11---------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------1----------------------------------------1---------1-12-12---------------2-1-12--1-1-1-1-----11----122--21211-1-1111111111--1--3------------1A--11---1----------41221-1--1----111----11-1----11--1-1-2--122-2222311--1-1-1--------------131---212---121------2--1135-11---121----------------------1-------1-------4--2---2----2-------2-111-------1-11--1111--2-11-111131--1-1----1--1-1--11-------2--2--------11------------------1---------4124----------------11---1---1----2--12--------1-1-------------------------111-1-------1111----------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------1------------------------------------1----------------------------------------------------------------------------- STR:NPRED 284 STR:RPRED 71.2 SQ:SECSTR ##################################################################################################ccHHHHHHHHHHHHTGGGcHHHHHHHHHHHHHHHHHHHTTcccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHTTccccGGGcHHHHHHHHHHHHHHHHTTccccccccccHHHHHHHTcccHHHHHHHHHHHHHHHHcccHHHHHHccGGGEEEcTTccEEEEEcccEHHHHHHHHHHHHHTcTTcTTEEccccccccHHHHHHHHHHHHHHHHccccTTccccccTTHHHHHHHHHHHHTTccHHHHHHHHTcccHHHHHHTcccHHHHHTTHHHHHT################# DISOP:02AL 1-2,399-400| PSIPRED cccccccHHHHHccccccccEEEEccccccEEEEEEccccEEEEEEEEEccccEEEEEEcccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccHHHccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccccHHHcccccccccccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccHHHHHHccHHHHcccccEEEEccccccccEEEccHHHHHHHHHHHHcccccEEEEccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccHHHHHHHc //