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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08166.1
DDBJ      :             Hydrogenase expression/formation protein HypE
Swiss-Prot:             

Homologs  Archaea  44/68 : Bacteria  311/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.139.1d.79.4
:370 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   36->370 2z1uA PDBj 6e-78 53.4 %
:RPS:PDB   23->370 3d54A PDBj 7e-50 16.5 %
:RPS:SCOP  29->202 1t3tA5  d.79.4.1 * 5e-26 12.5 %
:RPS:SCOP  189->366 2z1eA2  d.139.1.1 * 8e-30 41.0 %
:HMM:SCOP  28->189 1cliA1 d.79.4.1 * 7.2e-35 37.5 %
:HMM:SCOP  192->370 1vk3A3 d.139.1.1 * 1.5e-36 38.1 %
:HMM:PFM   195->346 PF02769 * AIRS_C 7.9e-34 38.6 145/151  
:HMM:PFM   65->162 PF00586 * AIRS 3.8e-19 35.1 94/96  
:BLT:SWISS 19->370 HYPE_RALEH e-129 70.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08166.1 GT:GENE ABF08166.1 GT:PRODUCT Hydrogenase expression/formation protein HypE GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(1401177..1402289) GB:FROM 1401177 GB:TO 1402289 GB:DIRECTION - GB:PRODUCT Hydrogenase expression/formation protein HypE GB:PROTEIN_ID ABF08166.1 GB:DB_XREF GI:93354077 InterPro:IPR000728 InterPro:IPR010918 InterPro:IPR011854 LENGTH 370 SQ:AASEQ MRTEHHQAGAGEAPAPKPVKKNYIRPLDIKHGRIDMGHGAGGKAAAQLIEELFLAAFDNEFLRQGDDGAVLALPAFDPAEGRLVMATDGHVISPLFFPGGDIGCLSVHGTVNDVAMSGARPLYLSASFIIEEGFPLVDLQRIVQSMAAAAREAGVPVVTGDTKVVEQGKGDGVFISTTGVGVLPPGVSISGRNARPGDVVLVSGSIGDHGVAVLSQRESLAFETTIESDTAALHTLVAAMLAAAPGAVRVLRDPTRGGLATTLNEVARQSGVGMLLQEAAIPVKPQVDAACELLGLDPLYVANEGKLIAVVAPEAAEAVLAAMRAHPLGQDAARIGEVTTDPHHFVQMATRFGGRRVVDWLSGEQLPRIC GT:EXON 1|1-370:0| BL:SWS:NREP 1 BL:SWS:REP 19->370|HYPE_RALEH|e-129|70.3|347/351| SEG 231->250|aalhtlvaamlaaapgavrv| SEG 309->322|avvapeaaeavlaa| BL:PDB:NREP 1 BL:PDB:REP 36->370|2z1uA|6e-78|53.4|326/335| RP:PDB:NREP 1 RP:PDB:REP 23->370|3d54A|7e-50|16.5|322/583| HM:PFM:NREP 2 HM:PFM:REP 195->346|PF02769|7.9e-34|38.6|145/151|AIRS_C| HM:PFM:REP 65->162|PF00586|3.8e-19|35.1|94/96|AIRS| RP:SCP:NREP 2 RP:SCP:REP 29->202|1t3tA5|5e-26|12.5|168/200|d.79.4.1| RP:SCP:REP 189->366|2z1eA2|8e-30|41.0|178/179|d.139.1.1| HM:SCP:REP 28->189|1cliA1|7.2e-35|37.5|160/0|d.79.4.1|1/1|PurM N-terminal domain-like| HM:SCP:REP 192->370|1vk3A3|1.5e-36|38.1|168/179|d.139.1.1|1/1|PurM C-terminal domain-like| OP:NHOMO 403 OP:NHOMOORG 355 OP:PATTERN --21211-------1-2-121111--1--2-11121111111111112--22221212211---1--- 112---1--------------1--12------2111-111-222------1--------------111-----------111-1111------1-------1--2--------------------1111111111111111111-231111111111------211-1111-----------------111---111111---1-1----------1--------------1-------------------------------------------------------------------------------------------1-11111111111112-------1-2-----1111--1-1-11--211--11----1-----12213---121-1---------------------------------1--11-----11111-----------1----1-1---------------------------------1--------------------2-------11--22-----11----1-1----11--------------1-11-11-111111111112222222-21111-11111111111111111111111111111111-1------111111-111111111111-----1-1------111111-1111111111-11111111111111111111111---1111111111111111111111111--1--------------------12221-1--111111-------------------1------------------1--------1------------------------------1--------------------------------------------1--------111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 348 STR:RPRED 94.1 SQ:SECSTR ######################THHHHHHHHccccHHHHHHHHHHTccccccTTTHHHHHHccccccTTEEEcccEcccccEEEEEEEEEccHHHHHccHHHHHHHHHHHHHHHHTTTcEEEEEEEEEEEccccHHcccHHHHHHHHHHHGGGTccEEEEEEEEcTTcTTcccEEEEEEEEEEEGGGcccccccccccEEEEEEccccccccccccccccHHHHHHHHHccccccHHHHHHHHHTTcccEEEEccccTHHHHHTHHHHTTTcEEEEEGGGcccccTTccHHHHHcccHHHcccccEEEEEEcTTccTTHHHHHHHTcTTcEEEEEEEEEcccEEEEEETTEEEEEEETHHHHcccccccc DISOP:02AL 1-7| PSIPRED cccccccccccccccccHHHcccccccccccccEEHHHccccHHHHHHHHHHHHccccccEEcccccEEEEEcccccccccEEEEEEcccEEccccccHHHHHHHHHHHHHHHHHHHccEEEEEEEEccccccccHHHHHHHHHHHHHHHHHcccEEEccEEEEccccccccEEEEEEEEEEEcccccccccccccccEEEEEccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHccccHHHHHHHHHHHHcccEEEEEHHHccccHHHHHHHHHHcccHHHHHccccEEEEEccHHHHHHHHHHHcccccccEEEEEEEEEcccEEEEEEEccccEEEEEccccccccccc //