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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08233.1
DDBJ      :             conjugation TrbI-like protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  182/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
:423 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   229->407 2bhvF PDBj 3e-13 30.9 %
:RPS:PDB   226->412 2bhvE PDBj 1e-51 29.0 %
:RPS:PFM   231->407 PF03743 * TrbI 7e-26 44.3 %
:HMM:PFM   227->409 PF03743 * TrbI 2.3e-60 44.0 182/187  
:BLT:SWISS 198->408 TRBI_RHIRD 2e-41 42.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08233.1 GT:GENE ABF08233.1 GT:PRODUCT conjugation TrbI-like protein GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1459093..1460364 GB:FROM 1459093 GB:TO 1460364 GB:DIRECTION + GB:PRODUCT conjugation TrbI-like protein GB:PROTEIN_ID ABF08233.1 GB:DB_XREF GI:93354144 InterPro:IPR005498 LENGTH 423 SQ:AASEQ MIQDDTPDLARPQAGKVAPEALALRAQPRPVTRLNRRTLAILVGGLSVAVLGATIWSLQPQRRSAGEQPELYNVDRVSKSEGLDGLPADYSKLQPKVPELGPPLPGDLGPAIVNSQQPAVAAYAAPGHHPNDALRKEEEAAAASSVFFRSGGQGPTAAVAQATPGAPGGASALAAFDPLAAGSASTAAQPGDPTAVQNRQDQKEAFLKAGSTETRNSGNLALPASPYQVMAGTVIAGALVTGIKSDLPGDVIATVTEPVYDTATGKYLLIPQGSRILGRYNSQVSYGQSRVQVVWNRIILPDTSSLTLDNLVGTDPAGYSGLEDDVDWHWNRIVAGAVLTTLLGVGAELAAPENRQDGNRIVIAGRDSAQDGINQVGQEITRRNMNIQPTLTERPGLPVRIIVNRDLVLRPYQPLFFNRGASQ GT:EXON 1|1-423:0| BL:SWS:NREP 1 BL:SWS:REP 198->408|TRBI_RHIRD|2e-41|42.0|205/433| SEG 98->110|pelgpplpgdlgp| SEG 137->143|eeeaaaa| SEG 151->185|ggqgptaavaqatpgapggasalaafdplaagsas| BL:PDB:NREP 1 BL:PDB:REP 229->407|2bhvF|3e-13|30.9|165/188| RP:PDB:NREP 1 RP:PDB:REP 226->412|2bhvE|1e-51|29.0|176/190| RP:PFM:NREP 1 RP:PFM:REP 231->407|PF03743|7e-26|44.3|176/192|TrbI| HM:PFM:NREP 1 HM:PFM:REP 227->409|PF03743|2.3e-60|44.0|182/187|TrbI| OP:NHOMO 295 OP:NHOMOORG 185 OP:PATTERN -------------------------------------------------------------------- 3--------------------------------------------------------------------------------------------------------------------------------------2-----------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------1---5223-4223-12-522322--211111111113-------11543-3335322211311711-2-3-1--11-11111111153-1---1111111111--11111111111111-11--132--1112111112-----2231----1--23-113--33111122232112--1---1----------2-1------1-----1------1------1-----------1--2--11-1121213-1----2--------------1----1----------------1---------1--------------1-------------------------------1------------1----------------1----1------1112---------------------------------11------------1------------1-1-----1----2121111---3--1----------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------1----1------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 191 STR:RPRED 45.2 SQ:SECSTR ################################################################################################################################################################################################################################GGGEEcTTccEEEEEcccEEccccEEEEEEEcccEEcccccccEEEcTTcEEEEEEEEEEccccEEEEEEEEEEEcTTccEEEcccccccTHHccccccHHHHHHHHHHTcccccEEEEEcccccEEEEcccccHHHHHHHHTcTTccHHHHHHHHHHHTTTcccEEEEcTTcEEEEEEccEEEcccccTT######## DISOP:02AL 1-6,8-11,15-15,61-73,130-145,181-221,350-375,421-424| PSIPRED ccccccccccccccccccHHHHcccccccccEEEcHHHHHHHHHHHHHHHHccHHHHcccccccccccccccccccccHHHHHHHccHHHcccccccccccccccccccHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHccccccccccHHHHHcccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccEEccccEEEEEEEcccccccccEEEEEEEccccccccccEEEEEcccEEEEEEEcccccccEEEEEEEEEEEcccccEEEEcccccccHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccEEEEEEcccccccccEEEEEcccccc //