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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08242.1
DDBJ      :             Polyhydroxyalkanoate synthesis repressor PhaR
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  166/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.159.5
:183 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   3->68 2bztA PDBj 1e-17 28.3 %
:RPS:PDB   70->163 1br2A PDBj 3e-06 11.7 %
:RPS:SCOP  4->66 1uj8A1  a.159.5.1 * 2e-17 28.1 %
:RPS:PFM   11->73 PF07879 * PHB_acc_N 5e-25 79.4 %
:RPS:PFM   76->116 PF05233 * PHB_acc 3e-07 61.0 %
:RPS:PFM   127->165 PF05233 * PHB_acc 9e-06 56.4 %
:HMM:PFM   75->115 PF05233 * PHB_acc 6.6e-23 51.2 41/41  
:HMM:PFM   126->165 PF05233 * PHB_acc 1.4e-20 47.5 40/41  
:HMM:PFM   10->71 PF07879 * PHB_acc_N 7.3e-35 77.4 62/64  
:BLT:SWISS 8->115 YPH4_THIVI 3e-34 60.2 %
:REPEAT 2|79->129|130->181

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08242.1 GT:GENE ABF08242.1 GT:PRODUCT Polyhydroxyalkanoate synthesis repressor PhaR GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1468751..1469302 GB:FROM 1468751 GB:TO 1469302 GB:DIRECTION + GB:PRODUCT Polyhydroxyalkanoate synthesis repressor PhaR GB:PROTEIN_ID ABF08242.1 GB:DB_XREF GI:93354153 InterPro:IPR007897 InterPro:IPR010134 InterPro:IPR012909 LENGTH 183 SQ:AASEQ MATSKKGAERLIKKYPNRRLYDTQTSTYITLADVKQLVMDSEEFKVVDAKSGEELTRSILLQIILEEETGGVPMFSSAMLSQIIRFYGHAMQGMMGTYLEKNIQAFIDIQSKLAENSKGLYSGEPFSPDMWSQFMNLQGPMMQGMMSNYIEQSKNLFVQMQEQMQNQAKSMFGTFPFNQPDKK GT:EXON 1|1-183:0| BL:SWS:NREP 1 BL:SWS:REP 8->115|YPH4_THIVI|3e-34|60.2|108/138| NREPEAT 1 REPEAT 2|79->129|130->181| RP:PDB:NREP 2 RP:PDB:REP 3->68|2bztA|1e-17|28.3|60/66| RP:PDB:REP 70->163|1br2A|3e-06|11.7|94/673| RP:PFM:NREP 3 RP:PFM:REP 11->73|PF07879|5e-25|79.4|63/64|PHB_acc_N| RP:PFM:REP 76->116|PF05233|3e-07|61.0|41/42|PHB_acc| RP:PFM:REP 127->165|PF05233|9e-06|56.4|39/42|PHB_acc| HM:PFM:NREP 3 HM:PFM:REP 75->115|PF05233|6.6e-23|51.2|41/41|PHB_acc| HM:PFM:REP 126->165|PF05233|1.4e-20|47.5|40/41|PHB_acc| HM:PFM:REP 10->71|PF07879|7.3e-35|77.4|62/64|PHB_acc_N| RP:SCP:NREP 1 RP:SCP:REP 4->66|1uj8A1|2e-17|28.1|57/64|a.159.5.1| OP:NHOMO 167 OP:NHOMOORG 167 OP:PATTERN -------------------------------------------------------------------- -11---------------------------------------------------------------------------------------------------------1----------------------------11---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111-----1111111111111------------11111111111-111111111111111111111111111--------111-1111------------------------------1111-1111111111111111111111111111111111111111111111111111----11----------111111---------------------11111-----------------------------------11-------------------------1-111--------------------------------------------------------------------------------------------------1111---1--------------------------1--------------1---------------------------1111111111------1-111111------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 154 STR:RPRED 84.2 SQ:SECSTR ##cHHHHHHHHHHHcTTc######cTTTccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHc#TTcTTEEEcccEEEEEETTEEEEEEcTTHHHHHHccccHHHHHHHHTcccHHHHHHTcccHHHHHHHHHHHHHHHHHTcEEEEEEEEccccccc#################### DISOP:02AL 1-10,109-123,161-168,180-184| PSIPRED ccccccccEEEEEEcccccccccccccEEEHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccc //