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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08264.1
DDBJ      :             transcriptional regulator, LytR/AlgR family
Swiss-Prot:             

Homologs  Archaea  12/68 : Bacteria  613/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
c.23.1
:273 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->111 2qv0A PDBj 2e-15 36.8 %
:BLT:PDB   188->273 3d6wB PDBj 7e-05 32.9 %
:RPS:PDB   1->58 2dvyD PDBj 5e-06 9.1 %
:RPS:PDB   32->118 3cwoX PDBj 3e-18 24.1 %
:RPS:PDB   169->273 3d6wA PDBj 1e-19 24.5 %
:RPS:SCOP  5->118 1a0oA  c.23.1.1 * 1e-17 26.8 %
:HMM:SCOP  2->131 1s8nA_ c.23.1.1 * 1.4e-28 35.4 %
:RPS:PFM   5->115 PF00072 * Response_reg 6e-13 38.0 %
:RPS:PFM   181->272 PF04397 * LytTR 2e-15 38.9 %
:HMM:PFM   179->272 PF04397 * LytTR 8.1e-27 39.8 93/98  
:HMM:PFM   5->115 PF00072 * Response_reg 8.7e-25 38.5 109/112  
:BLT:SWISS 2->273 Y8J3_VIBVU 6e-55 46.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08264.1 GT:GENE ABF08264.1 GT:PRODUCT transcriptional regulator, LytR/AlgR family GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1490576..1491397 GB:FROM 1490576 GB:TO 1491397 GB:DIRECTION + GB:PRODUCT transcriptional regulator, LytR/AlgR family GB:PROTEIN_ID ABF08264.1 GB:DB_XREF GI:93354175 InterPro:IPR001789 InterPro:IPR007492 LENGTH 273 SQ:AASEQ MSPTLLIADDEPLLARVLESELKALWPEAQIVAVVHDGVAALEATRDQQPDVAFLDIRMPGMSGMDVARELIEFDRPPLVVFVTAYDQFALEAFERAAVDYVLKPVQHERLEATVGRLKARMAARIEAEEEGDADSDIGTMVDTDRLGQLLQRLEMLERPAQARGQYLRFIKALVGQEVRIIPVDEVVYLEATDKYVNVVSSNGEALIRTSLRELMQQLDPDRFWQIHRGTVVNIDCVASAATQSLGRLSLKLRNRPESLAVARQYAHLFKQM GT:EXON 1|1-273:0| BL:SWS:NREP 1 BL:SWS:REP 2->273|Y8J3_VIBVU|6e-55|46.0|252/255| SEG 120->131|armaarieaeee| BL:PDB:NREP 2 BL:PDB:REP 5->111|2qv0A|2e-15|36.8|106/122| BL:PDB:REP 188->273|3d6wB|7e-05|32.9|82/107| RP:PDB:NREP 3 RP:PDB:REP 1->58|2dvyD|5e-06|9.1|55/214| RP:PDB:REP 32->118|3cwoX|3e-18|24.1|87/236| RP:PDB:REP 169->273|3d6wA|1e-19|24.5|102/107| RP:PFM:NREP 2 RP:PFM:REP 5->115|PF00072|6e-13|38.0|108/111|Response_reg| RP:PFM:REP 181->272|PF04397|2e-15|38.9|90/97|LytTR| HM:PFM:NREP 2 HM:PFM:REP 179->272|PF04397|8.1e-27|39.8|93/98|LytTR| HM:PFM:REP 5->115|PF00072|8.7e-25|38.5|109/112|Response_reg| GO:PFM:NREP 3 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| RP:SCP:NREP 1 RP:SCP:REP 5->118|1a0oA|1e-17|26.8|112/128|c.23.1.1| HM:SCP:REP 2->131|1s8nA_|1.4e-28|35.4|127/190|c.23.1.1|1/1|CheY-like| OP:NHOMO 1682 OP:NHOMOORG 630 OP:PATTERN -----------------------------2-----1--1111-----111----1-1-1--------- 37C26--11111-21-111-13--1211111-2223344431-234-211--321112--443-233AAA2-----1111213--1114473-9-----12G255T3R6C--------------1-------1-1-544A741271732311132-11112142211545112-1111111115531121-4346666655636565563244236643518222111111DP233333333333333233321-1-1-------12211--1--1---2221----1111111111111-------------1--111----175282222322-2153332232A4---213359B7433336541462128412221-----1-12331123111------------22-22122--1-111-------1111-1---------1-22222222----1312-------------------------1-11-22331111131333312133311251223123122223--23543222122422221232281----------21314C3-343-83776-7A6586B22316454-61-------------------13-2---322426326342333312123322121224----321------2232-322222222222-222222222222212222345311111212222222222222222212222--211111111111---1---------112-2---------------1111111-2-5211211111111121212---------12334333333334344425221331111--3-11-----11-11-1----------------------------21-11121-1-B- --------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------1-----------1--1-----3---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 269 STR:RPRED 98.5 SQ:SECSTR ccEEEEEEcccHHHHHHHHHHHHHGHccEEEEEccccccTTHHHHHHHccccEEEEcccTTccHHHHHHHHHHHcccccEEEEccccHHHHHHHHTTccEEEEcHHHHHcTHHHHHHHHHHHHHTcccccccccccHHHHHHHH####HHHTTcccccccccccHHcccEEEEEccccEEEEEGGGGEEEEEETTEEEEEEcccEEEEcccHHHHHHHccTTTEEEEETTEEEEGGGEEEEEccccccEEEETTcTccEEEEcTTTHHHHHHH DISOP:02AL 1-1,127-144| PSIPRED cccEEEEEcccHHHHHHHHHHHHHcccccEEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHcccccEEEEEEcccHHHHHHHHccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccEEEEEEEcccEEEEcHHHEEEEEEEccEEEEEEccccccHHHHHHHHHHHcccccEEEEEccEEEEHHHccccccccccEEEEEEccccEEEEEEHHHHHHHHcc //