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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08291.1
DDBJ      :             extracellular solute-binding protein, family 5
Swiss-Prot:             

Homologs  Archaea  33/68 : Bacteria  688/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
c.94.1
:518 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   40->517 1uqwA PDBj e-157 59.6 %
:RPS:PDB   39->511 3dp8B PDBj 9e-82 22.2 %
:RPS:SCOP  39->517 1uqwA  c.94.1.1 * 9e-97 57.9 %
:HMM:SCOP  30->517 1uqwA_ c.94.1.1 * 3e-137 35.7 %
:RPS:PFM   75->350 PF00496 * SBP_bac_5 3e-40 39.1 %
:HMM:PFM   74->432 PF00496 * SBP_bac_5 4.2e-95 34.7 354/372  
:BLT:SWISS 40->518 GSIB_ERWCT e-179 61.5 %
:PROS 80->102|PS01040|SBP_BACTERIAL_5
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08291.1 GT:GENE ABF08291.1 GT:PRODUCT extracellular solute-binding protein, family 5 GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1520900..1522456 GB:FROM 1520900 GB:TO 1522456 GB:DIRECTION + GB:PRODUCT extracellular solute-binding protein, family 5 GB:PROTEIN_ID ABF08291.1 GB:DB_XREF GI:93354202 InterPro:IPR000914 LENGTH 518 SQ:AASEQ MSDRKVSFRLMAGATAVGAMGMMAAAPAFAAKDAVMAVYSTFTTLDPYDANDTLSQAAVKSFYQGLFGFDKDMKLVNVLAESYDVSKDGLVYTIKLKKGVKFHDGTTFDATAVKANLDRVTDPANKLKRYTLFNRVAKTDVVDPNTVRITLKEPFSPFINVLAHPSAVMISPTALKKYGKEIAFHPVGTGPFEFVEWKQTDYLKGKKFAGYWKTGYPKIDTITWKPVVDNNTRSAVMQTGEADFAFSIPFEQAAVLKASPKVDLIDGPSIIQRYLSLNTMVKPFNDPKVRQAINYAINKEALAKVAFAGYAVPSAGVVPPGVDYAEKLGPWPYNPAKARELLKEAGYPNGFETTLWSAYNHTTAQKVIQFVQQQLQQVGIKAQVLALEAGQRVERVESVAKPEDAGVRMYYVGWSSSTGESDWALRPLLASEAMPPKLLNTAYYKNDQVDADIANALRTTDRAEKAKLYKDAQEQIWKDAPWAFLVTEKVLYARSKRLTGAYVMPDGSFNFDEIDIKQ GT:EXON 1|1-518:0| BL:SWS:NREP 1 BL:SWS:REP 40->518|GSIB_ERWCT|e-179|61.5|478/514| PROS 80->102|PS01040|SBP_BACTERIAL_5|PDOC00799| SEG 11->38|magatavgamgmmaaapafaakdavmav| SEG 308->322|agyavpsagvvppgv| SEG 364->384|aqkviqfvqqqlqqvgikaqv| BL:PDB:NREP 1 BL:PDB:REP 40->517|1uqwA|e-157|59.6|468/478| RP:PDB:NREP 1 RP:PDB:REP 39->511|3dp8B|9e-82|22.2|464/497| RP:PFM:NREP 1 RP:PFM:REP 75->350|PF00496|3e-40|39.1|274/366|SBP_bac_5| HM:PFM:NREP 1 HM:PFM:REP 74->432|PF00496|4.2e-95|34.7|354/372|SBP_bac_5| GO:PFM:NREP 2 GO:PFM GO:0005215|"GO:transporter activity"|PF00496|IPR000914| GO:PFM GO:0006810|"GO:transport"|PF00496|IPR000914| RP:SCP:NREP 1 RP:SCP:REP 39->517|1uqwA|9e-97|57.9|478/487|c.94.1.1| HM:SCP:REP 30->517|1uqwA_|3e-137|35.7|487/487|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 3407 OP:NHOMOORG 725 OP:PATTERN 221-1-----------1-1111-122233-2211---------1-3-33-HB6-2122--1-1-2--- 11--2352333-311------1---9------23332B5A-92L6743222-795213115511738248-5444644222-311111--------2--------11--122222221212222-11-------2-566412219D221122222111111111112321311111111111193411221323EFGFHDGG6FFHDDFA96662GFF2148864333333W613322234343333433322B365455--1-33--552222323324441222-11-----------11111111111113--111---21C33255545642523233111123242A-112898421-91-2371167111----1522631LLX--4942A-788A89A699M-34C32A4LMP--mOOTEDAMLINQN5-1148AB7B929B1111111112211-68-------------------------------2--1CFCBD8999986666676CB66662677H64A7--445-175652E5ET13--32261----------11-135-22262232231111111211----17111111-11111111111111113-11--562112111141111111211111121121---11--------79LG6BA7777778857-7776777676777677776CDCFD6775544545554555545F55655564-755566656666---1-----------5386661232111-6133------2-14525555484B47765-A9A1-11-11---33354444445544--1--------------F111111555242121--1------------------------1111136322241 -----------------1--------------------------------------------------------------------------------------------------------------------------------------------1----2---------------------2------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 480 STR:RPRED 92.7 SQ:SECSTR ######################################ccccccccTTccTTcccHHHHHHHccccEEEcTTccEEEccEEEEEEcTTccEEEEEEccccccTTcccccHHHHHHHHHHHHTTGGGGTTcHHHHHEEEEEEccccEEEEEEccccTTHHHHHTcccccccccGGGccccccTTccccccccEEEEEEETTTEEEEEEcTTcccGccccccEEEEEEcccHHHHHHHHHTTcccEEEcccHHHHHHHHTcTTcEEEEccccEEEEEEEcTTcTTTTcHHHHHHHHHHccHHHHHHTTTccccccccccccTTcTTccccccccccHHHHHHHHHHTTccccTTcEEEEETTcHHHHHHHHHHHHHHHTTTcEEEEEEEcHHHHHHHHHHTcccHHTcccEEEEEcccTTTTTHHHHHGGGccccHHHHTHTTTcTTHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHTTcEEEEEEEcEEEEEcGGGccccccccTTcccGGccccc DISOP:02AL 1-4| PSIPRED ccccEEEEEEEcccHHHHHHHHHHHcHHHcccccEEEEEcccccccccEEcccHHHHHHHHHHHHHEEEcccccEEEEEEEEEEEcccccEEEEEEccccEEcccccccHHHHHHHHHHHHcccccccHHHHHHHcccEEEccccEEEEEEccccHHHHHHHHccccccccHHHHHHcccHHcccccccccEEEEEEEcccEEEEEEcccccccccccEEEEEEEEEccHHHHHHHHHccccEEEEcccHHHHHHHHccccEEEEEccccEEEEEEEEccccccccHHHHHHHHHHccHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHcccccccEEEEEEccccccHHHHHHHHHHHHHHcccEEEEEEEEHHHHHHHHHHHcccccccEEEEEEEcccccccHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccEEEEEEccEEEEEEccEEEEEEccccccccccEEEEc //