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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08314.1
DDBJ      :             transcriptional regulator, XRE family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  125/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.35.1
:303 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   28->118 1b0nA PDBj 3e-07 20.8 %
:RPS:SCOP  28->102 1b0nA2  a.35.1.3 * 4e-07 23.7 %
:HMM:SCOP  43->102 1b0nA2 a.35.1.3 * 0.00057 30.0 %
:HMM:PFM   56->102 PF01381 * HTH_3 4.5e-07 30.4 46/55  
:BLT:SWISS 187->299 SYG_NOCFA 9e-04 34.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08314.1 GT:GENE ABF08314.1 GT:PRODUCT transcriptional regulator, XRE family GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1549606..1550517 GB:FROM 1549606 GB:TO 1550517 GB:DIRECTION + GB:PRODUCT transcriptional regulator, XRE family GB:PROTEIN_ID ABF08314.1 GB:DB_XREF GI:93354225 InterPro:IPR001387 LENGTH 303 SQ:AASEQ MNARQEPGVLLDVDGYEEIEGTGREPELGAFLRARRESLDPARLGLSRMGRRRTPGLRREEVAAMADIGITWYTKLEQGRPIRVSPKVLNAVAAALQCSPSETEHLFTLAGMQRPAPLAGTSVCETVSATTQRVLDQLDPIPALVQNARFDIVAHNEAYCRLLGVDLPGLPVEDRNCIYLALTHPAWRAIVVDWHGMVANMVALYRAAMAEHVHDPVWDAQLKRYMAVSALFRDLWQRYQVRGIQNHVKQFTHPETGAFNLTQTNWWTAPRNGARLLVYVPADESAEEALHKLRPVTGQSAGI GT:EXON 1|1-303:0| BL:SWS:NREP 1 BL:SWS:REP 187->299|SYG_NOCFA|9e-04|34.0|106/100| SEG 48->59|rmgrrrtpglrr| RP:PDB:NREP 1 RP:PDB:REP 28->118|1b0nA|3e-07|20.8|72/103| HM:PFM:NREP 1 HM:PFM:REP 56->102|PF01381|4.5e-07|30.4|46/55|HTH_3| RP:SCP:NREP 1 RP:SCP:REP 28->102|1b0nA2|4e-07|23.7|59/68|a.35.1.3| HM:SCP:REP 43->102|1b0nA2|0.00057|30.0|60/0|a.35.1.3|1/1|lambda repressor-like DNA-binding domains| OP:NHOMO 287 OP:NHOMOORG 125 OP:PATTERN -------------------------------------------------------------------- ----I--1223---2------1---C------43333342-636723--21-463--3--31--G-86E2--------------------------------------------------------------------------1------------------------------------------------2-------------------------------------33-------------------------1--------------------------------------------------------------------2------------------------------------------------1--------11311---21------------------------2--1--111-222--1--1-------------------1-1-11-1-----------------------------------111122332321111122121111112221112--11-------------1-----1-----------------------------------------1-----------------------------11-------1-----------1-----------------------1111-1-------------------------------22212-------------------2-------------------------------------1----------------------------1111----1--------------------------------11----------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 109 STR:RPRED 36.0 SQ:SECSTR ###############cccccHHHcHHccHHHHHHHHHH####HTTccH##########HHHHHHHHTccHHHHHHHHTTccccccHHHHHHHHHHHTccHHHHHHHHccTTccccHHHcHHHHHHHHHHTTccccccc##################################################################################################################################################################### DISOP:02AL 1-10,116-124,300-304| PSIPRED ccccccccccccccccccccccccHHHHHHHHHHHHHHccHHHcccHHHcccccccccHHHHHHHHcccHHHHHHHHccccccccHHHHHHHHHHHcccHHHHHHHHHHcccccccccccccccccccHHHHHHHHHcccccEEEEcccccHHHHHHHHHHHHcccccccccccccEEHHHHccHHHHHHcccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccHHHHHHHHHccccccccccEEEEcccEEEEEEEEEEcccccccccEEEEEcccccHHHHHHHHHHHHHHHHccc //