[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08331.1
DDBJ      :             lipid-A-disaccharide synthase
Swiss-Prot:LPXB_RALME   RecName: Full=Lipid-A-disaccharide synthase;         EC=2.4.1.182;

Homologs  Archaea  0/68 : Bacteria  552/915 : Eukaryota  7/199 : Viruses  0/175   --->[See Alignment]
c.87.1
:401 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   59->353 3beoA PDBj 1e-10 12.0 %
:RPS:SCOP  71->397 1f0kA  c.87.1.2 * 3e-09 20.9 %
:HMM:SCOP  19->398 1f6dA_ c.87.1.3 * 1e-24 19.5 %
:RPS:PFM   52->361 PF02684 * LpxB 3e-80 51.6 %
:HMM:PFM   23->386 PF02684 * LpxB 3.5e-94 37.3 362/373  
:BLT:SWISS 1->401 LPXB_RALME 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08331.1 GT:GENE ABF08331.1 GT:PRODUCT lipid-A-disaccharide synthase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1569597..1570802 GB:FROM 1569597 GB:TO 1570802 GB:DIRECTION + GB:PRODUCT lipid-A-disaccharide synthase GB:PROTEIN_ID ABF08331.1 GB:DB_XREF GI:93354242 InterPro:IPR003835 LENGTH 401 SQ:AASEQ MVDTVQAVLPADAGANGNKRGSIAMVAGEASGDLLASLLLEGLRARLGESVDYAGIGGHRMMAQGFVSHWPMETLSVNGYVEVLGSLREILATRREIREQLLARPPLCFIGVDAPDFNFGLEVPLRRAGIPVVHFVSPSIWAWRGGRIRTIARAVDHILCLFPFEPEIYAKAGIPATYVGHPLADVIPMVPDVAGARAKLALPEGKRIVAVLPGSRQSEVRNLGATFFAAMDRMHRMDGNLAFVLPVASAPLREIVAGLHAQYPDIDLTVVDGQSHLAMESADVVLLASGTATLEAALYKKPMVISYKVPWLTAQIMKRQGYLPYVGLPNILSGRFVVPELLQDDATPEALARETLLQLNDEGNIAFLRQHFTTMHETLKRDTAKLAAGVVVDLMRSRGVV GT:EXON 1|1-401:0| SW:ID LPXB_RALME SW:DE RecName: Full=Lipid-A-disaccharide synthase; EC=2.4.1.182; SW:GN Name=lpxB; OrderedLocusNames=Rmet_1448; SW:KW Complete proteome; Glycosyltransferase; Lipid A biosynthesis;Lipid synthesis; Transferase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->401|LPXB_RALME|0.0|100.0|401/401| GO:SWS:NREP 4 GO:SWS GO:0016757|"GO:transferase activity, transferring glycosyl groups"|Glycosyltransferase| GO:SWS GO:0009245|"GO:lipid A biosynthetic process"|Lipid A biosynthesis| GO:SWS GO:0008610|"GO:lipid biosynthetic process"|Lipid synthesis| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| SEG 27->50|ageasgdllasllleglrarlges| RP:PDB:NREP 1 RP:PDB:REP 59->353|3beoA|1e-10|12.0|291/375| RP:PFM:NREP 1 RP:PFM:REP 52->361|PF02684|3e-80|51.6|310/368|LpxB| HM:PFM:NREP 1 HM:PFM:REP 23->386|PF02684|3.5e-94|37.3|362/373|LpxB| GO:PFM:NREP 2 GO:PFM GO:0008915|"GO:lipid-A-disaccharide synthase activity"|PF02684|IPR003835| GO:PFM GO:0009245|"GO:lipid A biosynthetic process"|PF02684|IPR003835| RP:SCP:NREP 1 RP:SCP:REP 71->397|1f0kA|3e-09|20.9|287/351|c.87.1.2| HM:SCP:REP 19->398|1f6dA_|1e-24|19.5|354/0|c.87.1.3|1/1|UDP-Glycosyltransferase/glycogen phosphorylase| OP:NHOMO 566 OP:NHOMOORG 559 OP:PATTERN -------------------------------------------------------------------- 111--------------------------------------------------------------------------------111111111-1111--111111111-111111111111111111111111111----------1211111111111111111111111111111111111-----111---------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------11111111111111--1111111111111111111111-1111111111111111111111111111111111111111111111111111111------------1111111111111----1-----11111111111111111111111111111111111111111111111111111111111111111---11111111111--1111111111111111111-11111111111111111111111111111111111111111111111111111111111--11111------11111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111122221111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111----------------------------------------------111 ------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------1---------311---1-----1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 291 STR:RPRED 72.6 SQ:SECSTR ##########################################################cHHHHHHHHHHTccccEEcccccTTccHHHHHHHHHHHHHHHHHHHcccEEEEETTcHHHHHHHHHHHHTTccEEEEccccccccTTccTHHHHHHccEEEEccHHHHHHHHHTTccGEEcccHHHHHHHHHcccccccHHHHTTTTcEEEEEEcccGGGTTHHH#HHHHHHHHHHHHHcTTEEEEEEcccHHHHHHHHHHTTcTTEEEccccHHHHHHHHHTccEEEEccHHHHHHHHHHTccEEEcc#cccccHHHHHTTcEEEccccHHHHHHH##HHHHHHcHHHHHHHcc################################################ DISOP:02AL 1-2,380-381,400-402| PSIPRED cccHHHHHcccccccccccccEEEEEEccccHHHHHHHHHHHHHHHcccEEEEEEEccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHHHHHHccccHHHHHHccccEEEEcccHHHHHHccccHHHHHHHccccccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHcccccEEEcccHHHHHHHHHHHHHHHccHHHHHHHHHcccEEEEEEcccHHHHHHHHHHccccccHHHHHccccccHHHHcccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccc //