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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08332.1
DDBJ      :             RNase HII
Swiss-Prot:RNH2_RALME   RecName: Full=Ribonuclease HII;         Short=RNase HII;         EC=3.1.26.4;

Homologs  Archaea  32/68 : Bacteria  861/915 : Eukaryota  60/199 : Viruses  1/175   --->[See Alignment]
c.55.3
:226 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   26->217 2etjA PDBj 1e-26 47.4 %
:RPS:PDB   25->215 2dffA PDBj 2e-62 31.9 %
:RPS:SCOP  27->217 2etjA1  c.55.3.1 * 8e-66 47.7 %
:HMM:SCOP  13->212 2etjA1 c.55.3.1 * 3.1e-68 53.9 %
:RPS:PFM   28->206 PF01351 * RNase_HII 2e-44 60.0 %
:HMM:PFM   27->207 PF01351 * RNase_HII 7e-52 42.4 177/198  
:BLT:SWISS 1->226 RNH2_RALME e-127 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08332.1 GT:GENE ABF08332.1 GT:PRODUCT RNase HII GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1570802..1571482 GB:FROM 1570802 GB:TO 1571482 GB:DIRECTION + GB:PRODUCT RNase HII GB:PROTEIN_ID ABF08332.1 GB:DB_XREF GI:93354243 InterPro:IPR001352 LENGTH 226 SQ:AASEQ MARTKAAASSQLGLELTQTVAVVQRLCGVDEAGRGPLAGPVYAAAVVLNPARQIRGLADSKILSAEKREALFDRICDHALGWHIASASVEEIDSINILHASMLAMQRAVQGLAASGVIPDLVQVDGNRCPQVAFPVEAIVKGDAKVRAISAASILAKVARDRELLKLHQEYPEYGFDSHFGYPTPQHFTALEQFGATPHHRRSFAPVRKVLERGMVRTMSSEAPPF GT:EXON 1|1-226:0| SW:ID RNH2_RALME SW:DE RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; SW:GN Name=rnhB; OrderedLocusNames=Rmet_1449; SW:KW Complete proteome; Cytoplasm; Endonuclease; Hydrolase; Manganese;Metal-binding; Nuclease. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->226|RNH2_RALME|e-127|100.0|226/226| GO:SWS:NREP 5 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0004519|"GO:endonuclease activity"|Endonuclease| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0004518|"GO:nuclease activity"|Nuclease| BL:PDB:NREP 1 BL:PDB:REP 26->217|2etjA|1e-26|47.4|171/206| RP:PDB:NREP 1 RP:PDB:REP 25->215|2dffA|2e-62|31.9|188/210| RP:PFM:NREP 1 RP:PFM:REP 28->206|PF01351|2e-44|60.0|175/190|RNase_HII| HM:PFM:NREP 1 HM:PFM:REP 27->207|PF01351|7e-52|42.4|177/198|RNase_HII| GO:PFM:NREP 2 GO:PFM GO:0003723|"GO:RNA binding"|PF01351|IPR001352| GO:PFM GO:0004523|"GO:ribonuclease H activity"|PF01351|IPR001352| RP:SCP:NREP 1 RP:SCP:REP 27->217|2etjA1|8e-66|47.7|174/211|c.55.3.1| HM:SCP:REP 13->212|2etjA1|3.1e-68|53.9|193/0|c.55.3.1|1/1|Ribonuclease H-like| OP:NHOMO 993 OP:NHOMOORG 954 OP:PATTERN ------1111111111--11------------1----------111---111111111111-111-1- 1111111111111111111-111111111111111111111111111-11111111-1---11111111111------1111-111111111-1112--1111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111211111112111111111111111-111111111112111111111111111111111-1111211111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112111111111111111111111111111111111111111111111111111111111111-1211111---1111111111111111111111111111111111111111111111111--11111------11111111111111111-1111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111211111111111111111111111111111111111111111111111--11111111111111111-1----1-1-1-1-----111------1111111111111 ----1---211----1------------------------------1---------------1----------1------------11-111-11-1--1--1---1-1-2-----------1------141-111-----1------------1----111-1----1-71--11211A11111311--113322111 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-- STR:NPRED 204 STR:RPRED 90.3 SQ:SECSTR ###########cEEEEEEcTT##EEEEEEEEEccccccccEEEEEEEEETTTHTTTGGGGccccHHHHHHHHHHHHTTccEEEEEEEcHHHHTTccHHHHHHHHHHHHHTTccTccccccEEEEEEccccHHHHEEEEEETcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccTTccTTcHHHHHHHHHHHTccccTTccTTcTHHHHHHHHccHH######### DISOP:02AL 1-12,220-222,226-227| PSIPRED cccccccccccccccHHHHHccccEEEEEcccccccccccEEEEEEEEcHHHccccccccccccHHHHHHHHHHHHHHccEEEEEEEEHHHHHHccHHHHHHHHHHHHHHHHHHccccccEEEEcccccccccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHccccEEEccHHHHHHHHHHccccccccccccc //