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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08340.1
DDBJ      :             cyclase/dehydrase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  390/915 : Eukaryota  63/199 : Viruses  0/175   --->[See Alignment]
d.129.3
:149 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->142 1t17A PDBj 7e-17 30.8 %
:RPS:PDB   3->143 2d4rC PDBj 2e-24 15.7 %
:RPS:SCOP  1->142 1t17A  d.129.3.6 * 6e-48 29.8 %
:HMM:SCOP  1->144 1t17A_ d.129.3.6 * 4.7e-31 30.1 %
:RPS:PFM   14->135 PF03364 * Polyketide_cyc 1e-28 45.9 %
:HMM:PFM   11->134 PF03364 * Polyketide_cyc 3.1e-33 30.6 124/130  
:BLT:SWISS 1->143 YFJG_SHIFL 2e-31 43.4 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08340.1 GT:GENE ABF08340.1 GT:PRODUCT cyclase/dehydrase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1578832..1579281 GB:FROM 1578832 GB:TO 1579281 GB:DIRECTION + GB:PRODUCT cyclase/dehydrase GB:PROTEIN_ID ABF08340.1 GB:DB_XREF GI:93354251 InterPro:IPR005031 LENGTH 149 SQ:AASEQ MADVHKSVLLGHSAEQMYDLVTRVEDYPKFLPWCGGVEVFEQTDTLLDAKIHIHFKGIKQFFHTRNAQERPTRIDMTFADGPFKVFNGSWRFTPLREDACKIEFHLHYEFTSVFLEKIIGPVFSVIANTFVDAFVKRAEVVYANNANNG GT:EXON 1|1-149:0| BL:SWS:NREP 1 BL:SWS:REP 1->143|YFJG_SHIFL|2e-31|43.4|143/158| TM:NTM 1 TM:REGION 112->134| BL:PDB:NREP 1 BL:PDB:REP 9->142|1t17A|7e-17|30.8|133/148| RP:PDB:NREP 1 RP:PDB:REP 3->143|2d4rC|2e-24|15.7|140/143| RP:PFM:NREP 1 RP:PFM:REP 14->135|PF03364|1e-28|45.9|122/128|Polyketide_cyc| HM:PFM:NREP 1 HM:PFM:REP 11->134|PF03364|3.1e-33|30.6|124/130|Polyketide_cyc| RP:SCP:NREP 1 RP:SCP:REP 1->142|1t17A|6e-48|29.8|141/148|d.129.3.6| HM:SCP:REP 1->144|1t17A_|4.7e-31|30.1|143/0|d.129.3.6|1/1|Bet v1-like| OP:NHOMO 516 OP:NHOMOORG 453 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111111111111111-1111111111111111-111111111111111111111111111-11111111111111111111111121111111111----11111111111111-11-11111111111111111111111111-1111111111111111111111111111121111111111111111111----------------------------1----------------------------11111111111111111111111111111111--11111------11111111111111111-1111111111111111111111111111111111111111111111111-11111111111111111111111111111-111111-1-1----1111----------111111111111111111111111111111111111111111111111111111111111-------------------------------------------------------- ----------------------------------------------------------------------------------------------1---------1-----134333-212212224-117B3-3351111212222-21-2--1211321---2111-12--1211---------2--1-11--1111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 144 STR:RPRED 96.6 SQ:SECSTR ccEEEEEEEEcccHHHHHHHHHcHHHHGGGcTTEEEEEEEEEETTEEEEEEEEEETEEEEEEEEEEEETTTTEEEEEEEEEcccEEEEEEEEEEETTTEEEEEEEEEEEccccccTTTcHHHHHHHHHHHHHHHHHHHHHHHHH##### DISOP:02AL 1-1,145-150| PSIPRED cccEEEEEEEcccHHHHHHHHHcHHHcHHHcccccEEEEEEEcccEEEEEEEEEEccEEEEEEEEEEEEcccEEEEEEEccccEEEEEEEEEEEcccccEEEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc //