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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08371.1
DDBJ      :             TraF peptidase. Serine peptidase. MEROPS family S26C
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  48/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.87.1
:195 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   108->190 1b12A PDBj 1e-11 22.8 %
:RPS:SCOP  126->191 1b12A  b.87.1.2 * 4e-07 27.4 %
:HMM:SCOP  71->190 1b12A_ b.87.1.2 * 1.2e-16 27.8 %
:RPS:PFM   100->191 PF10502 * Peptidase_S26 1e-14 46.7 %
:HMM:PFM   46->190 PF10502 * Peptidase_S26 4.3e-58 65.7 137/138  
:BLT:SWISS 105->189 TRAF4_ECOLX 9e-15 44.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08371.1 GT:GENE ABF08371.1 GT:PRODUCT TraF peptidase. Serine peptidase. MEROPS family S26C GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1607397..1607984 GB:FROM 1607397 GB:TO 1607984 GB:DIRECTION + GB:PRODUCT TraF peptidase. Serine peptidase. MEROPS family S26C GB:PROTEIN_ID ABF08371.1 GB:DB_XREF GI:93354282 LENGTH 195 SQ:AASEQ MTAVSPADTAPRPRSRLHARIVLAGLSACGLAALAWASFVHPLPRLTYNPSDSVAVGWYRVDPLDHRASSPPRPLSVGSIVLVPLPAEAAALAAQRGYLPTRIPLLKRVGAVAPQEVCIADGSVRIDGVPSAAVLPADRLGRPLPSWQQCRRLRSGELFLLSVINPASFDSRYFGPVSAATVIGVARPIWLESRP GT:EXON 1|1-195:0| BL:SWS:NREP 1 BL:SWS:REP 105->189|TRAF4_ECOLX|9e-15|44.7|85/177| TM:NTM 2 TM:REGION 18->40| TM:REGION 74->96| SEG 23->38|laglsacglaalawas| SEG 81->94|vlvplpaeaaalaa| RP:PDB:NREP 1 RP:PDB:REP 108->190|1b12A|1e-11|22.8|79/239| RP:PFM:NREP 1 RP:PFM:REP 100->191|PF10502|1e-14|46.7|92/101|Peptidase_S26| HM:PFM:NREP 1 HM:PFM:REP 46->190|PF10502|4.3e-58|65.7|137/138|Peptidase_S26| RP:SCP:NREP 1 RP:SCP:REP 126->191|1b12A|4e-07|27.4|62/239|b.87.1.2| HM:SCP:REP 71->190|1b12A_|1.2e-16|27.8|108/247|b.87.1.2|1/1|LexA/Signal peptidase| OP:NHOMO 85 OP:NHOMOORG 48 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------1----1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------5--1-------1-3-13-2--1----------1-------1-323----1---1----16-----4----------------54------------------------------------1221----2-----1-----11------1-------3---11--12221--1--------------------1-------------------1------------------------------------------------------------1----------------1------------------------------------------------------------------------------------------------------------------------------------1--11--------------------------------------1------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 96 STR:RPRED 49.2 SQ:SECSTR ###############################################################################################cEEEEccTTcccEEEEEEEEETTEEEEEEEcTTccccGGGccccTTccTTEETTEEEccTTEEEEEcccTTccccHHHHccEEGGGEEEEEEEEEE#### DISOP:02AL 1-9,194-196| PSIPRED cccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHcccccEEEEccccccEEEEEEEEEccccccccccccccccEEEEEcccHHHHHHHccccccccccEEEEEEEccccEEEEEccEEEEccEEcccHHHHHHcccccccccccEEccccEEEEEcccccccccccEEEEEEHHHEEEEEEEEcccccc //