[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08425.1
DDBJ      :             response regulator receiver domain protein (CheY-like)
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  415/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
c.23.1
:309 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->143 2vuiB PDBj 1e-39 51.5 %
:RPS:PDB   28->144 3cwoX PDBj 9e-22 18.1 %
:RPS:SCOP  10->127 1p2fA2  c.23.1.1 * 1e-22 21.7 %
:HMM:SCOP  5->140 1s8nA_ c.23.1.1 * 8.3e-32 38.8 %
:RPS:PFM   10->116 PF00072 * Response_reg 3e-17 37.7 %
:HMM:PFM   10->119 PF00072 * Response_reg 1.5e-23 34.9 109/112  
:BLT:SWISS 9->149 HOXA_RALEH 1e-51 66.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08425.1 GT:GENE ABF08425.1 GT:PRODUCT response regulator receiver domain protein (CheY-like) GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1663625..1664554 GB:FROM 1663625 GB:TO 1664554 GB:DIRECTION + GB:PRODUCT response regulator receiver domain protein (CheY-like) GB:PROTEIN_ID ABF08425.1 GB:DB_XREF GI:93354336 InterPro:IPR001789 LENGTH 309 SQ:AASEQ MTTKTRLPTVLVVDDEVRSQEALRRTLEEEFEVLTASGAGEARGIMERDFVQLLLCDQRMPGMSGVEFLKQVRSQWPDVVRMIISGYTDSKDIIAGINDAGIYQYILKPWQPEQLLLTLHNAAELYRLQSENQRLALELRTSEPVLKKRVHVGAAGGGDNGRFQAGGLRFAQLARHAGTNLHEAGDHGLGVAARLVLVQGSDEPVHVACGEQVRVVLGQETPDALLAAGDLEQNAITLQAPVPQVCTAPGSGIPPEPFHEGARSFLGRSGERLAGPIAAKVALNAWRCSCSVSARVPSTSKSSALSVMT GT:EXON 1|1-309:0| BL:SWS:NREP 1 BL:SWS:REP 9->149|HOXA_RALEH|1e-51|66.0|141/482| BL:PDB:NREP 1 BL:PDB:REP 8->143|2vuiB|1e-39|51.5|136/137| RP:PDB:NREP 1 RP:PDB:REP 28->144|3cwoX|9e-22|18.1|116/236| RP:PFM:NREP 1 RP:PFM:REP 10->116|PF00072|3e-17|37.7|106/111|Response_reg| HM:PFM:NREP 1 HM:PFM:REP 10->119|PF00072|1.5e-23|34.9|109/112|Response_reg| GO:PFM:NREP 3 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| RP:SCP:NREP 1 RP:SCP:REP 10->127|1p2fA2|1e-22|21.7|115/120|c.23.1.1| HM:SCP:REP 5->140|1s8nA_|8.3e-32|38.8|134/190|c.23.1.1|1/1|CheY-like| OP:NHOMO 1158 OP:NHOMOORG 425 OP:PATTERN -----------------------------3-1------------1-12-3------------------ 265--1-1-----1-------1----------1111--1----12-----------1---1---2---1--------------1----1121-------2-3132726241-------------11--22--235-1--33321--7-13--111-----------25576------------------111-----------------2211-------1--3-1-11-13B-11111111111111---1-1-----------------------------1-11--11111111111------------------------1114----------1---1-----11----11332-12--111-12---563---11-1-13-311---121-111111111112-11311212-11-1222---2121145333125222213411111111-11217-3-----------------------------------1----21111212222--432222121243343--22224----3-9-1--22412-1---------12384KJD34G43FA66A2IHMKGFG7B8687F65B-------1-------------2--1441--23342411223331212223-41-3-1----4-2--------2111-------------------------------111---------------------2-1-----------111--211---211111----11C13111-121----1--111222222321155653855454541444----------3221444445425511111111121111--21223355-----1-111-------------------------------1-1-1281 --------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------1--------------1-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 259 STR:RPRED 83.8 SQ:SECSTR ccccTTcEEEEEEcccHHHHHHHHHHHccEEEEEccccccTTHHHHHHHccccEEEEcccTTccHHHHHHHHHHHcccccEEEEccccTHHHHHHHHHHTTccEEEEcHHHHHcTHHHHHHHHHHTGGGEEEEEEEEEccccEEGGGGccccccccccHHHHHHHHccccEEEEcHHHHHHcHHH##############HHHHHHHHHHTTccEEEEccccHHHHHHHHHHTTccEEEEccHHHHHHHHHHHccTTccccccEEEEEccccHH#################################### DISOP:02AL 1-5,129-143,154-158,303-303| PSIPRED ccccccccEEEEEcccHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHcccccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHccccccEEccccccEEEEEEccccHHHHHHHHHHHHHHHccccccccEEcccccccccccHHHHHHHHHcccHHHcccHHHHEEEcEEEEEEEEccccccccccccccccc //