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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08451.1
DDBJ      :             transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  145/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
d.110.3
:139 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->92 1d06A PDBj 4e-11 35.4 %
:RPS:PDB   15->130 1drmA PDBj 3e-18 23.7 %
:RPS:SCOP  10->122 1s66L  d.110.3.2 * 2e-23 26.1 %
:HMM:SCOP  17->130 1dp6A_ d.110.3.2 * 1.4e-26 33.0 %
:RPS:PFM   12->124 PF08448 * PAS_4 9e-14 35.8 %
:HMM:PFM   10->121 PF00989 * PAS 4.2e-21 33.9 109/113  
:BLT:SWISS 11->126 FIXL_RHIME 4e-11 31.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08451.1 GT:GENE ABF08451.1 GT:PRODUCT transcriptional regulator GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(1689494..1689913) GB:FROM 1689494 GB:TO 1689913 GB:DIRECTION - GB:PRODUCT transcriptional regulator GB:PROTEIN_ID ABF08451.1 GB:DB_XREF GI:93354362 InterPro:IPR000014 InterPro:IPR000700 LENGTH 139 SQ:AASEQ MTISTNTAAQILEQLADALIFADTDGRITGWNHAAAELFGYGPDEALGQSLDLIIPERLQAAHWKGFQAAIDTGKTRLSGKPTLTKAIHKDGRKLFVEMTFALISDANGNVIGSVAVARDVTDKVERERAQSAAGPVSR GT:EXON 1|1-139:0| BL:SWS:NREP 1 BL:SWS:REP 11->126|FIXL_RHIME|4e-11|31.6|114/505| BL:PDB:NREP 1 BL:PDB:REP 11->92|1d06A|4e-11|35.4|82/130| RP:PDB:NREP 1 RP:PDB:REP 15->130|1drmA|3e-18|23.7|114/119| RP:PFM:NREP 1 RP:PFM:REP 12->124|PF08448|9e-14|35.8|109/111|PAS_4| HM:PFM:NREP 1 HM:PFM:REP 10->121|PF00989|4.2e-21|33.9|109/113|PAS| RP:SCP:NREP 1 RP:SCP:REP 10->122|1s66L|2e-23|26.1|111/119|d.110.3.2| HM:SCP:REP 17->130|1dp6A_|1.4e-26|33.0|112/0|d.110.3.2|1/1|PYP-like sensor domain (PAS domain)| OP:NHOMO 253 OP:NHOMOORG 158 OP:PATTERN -----------------------12--1-1-1--1------------1--843--------------- 356----1111--------------1--------------11-12---------1-------------1--------------------------------------111------------------------------------211111---------------1-11------------1----------------------------------------1------------------------------------------------------------------------------------------------------1------------11------------------------1-1----111---------113331111--1-------------12312211221-1221-111212312----------1-1-------------2-1-------------------------------1-------------------1112--------31311-2---2-----1211-22--222-----------42211--21----1-11--2235214141231-2-2------------------------3------111----1-11111-1---------1---2---------1-2--------------------------------------------------------------------1------------------------2-2----------------------------1--1-----1------12----------------------------------------1------------------------------------------------------1- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----1--2- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 132 STR:RPRED 95.0 SQ:SECSTR ##HHHcccHccccccccEEEEEETTccEEEEcHHHHHHHcccHHHHTTccGGGGccTTHHHHHHHHHHHHHHHcccccTTTcEEEEEEcTTccEEEEEEEEEEEEEEETTEEEEEEEEEEcHHHHHHHHHHHHc##### DISOP:02AL 133-133,135-140| PSIPRED cHHHHHHHHHHHHHcccEEEEEEccccEEEEcHHHHHHHcccHHHHccccHHHHccHHHHHHHHHHHHHHHHcccccccccEEEEEEEcccccEEEEEEEEEEEEcccccEEEEEEEEEEcHHHHHHHHHHHHHHHHcc //