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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08456.1
DDBJ      :             tRNA-adenosine deaminase
Swiss-Prot:             

Homologs  Archaea  11/68 : Bacteria  813/915 : Eukaryota  83/199 : Viruses  0/175   --->[See Alignment]
c.97.1
:189 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   43->155 1z3aA PDBj 9e-33 51.3 %
:RPS:PDB   43->155 2b3jD PDBj 2e-34 48.7 %
:RPS:SCOP  43->155 1wwrA1  c.97.1.2 * 2e-33 40.2 %
:HMM:SCOP  8->163 1z3aA1 c.97.1.2 * 1.8e-54 48.7 %
:RPS:PFM   43->111 PF00383 * dCMP_cyt_deam_1 8e-14 47.1 %
:HMM:PFM   13->111 PF00383 * dCMP_cyt_deam_1 7e-27 36.7 98/102  
:BLT:SWISS 43->155 TADA_SHIFL 3e-32 51.3 %
:PROS 63->100|PS00903|CYT_DCMP_DEAMINASES
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08456.1 GT:GENE ABF08456.1 GT:PRODUCT tRNA-adenosine deaminase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1692830..1693399 GB:FROM 1692830 GB:TO 1693399 GB:DIRECTION + GB:PRODUCT tRNA-adenosine deaminase GB:PROTEIN_ID ABF08456.1 GB:DB_XREF GI:93354367 InterPro:IPR002125 LENGTH 189 SQ:AASEQ MADVPVFADPAERDRFYMAAALDEARLAEAAGEVPVGAVVVWDDKIIARGHNLPIRSVDPSAHAEMQALRAAAKVLGNYRMPECEIYVTLEPCPMCSGAILHARLRHVVFGATDPKTGAAGSVVDLFAQATLNHQTTLTRGVMADECGQLLRDFFGARRRAQKAARALQVSPVDADSGKIQASDPNSET GT:EXON 1|1-189:0| BL:SWS:NREP 1 BL:SWS:REP 43->155|TADA_SHIFL|3e-32|51.3|113/167| PROS 63->100|PS00903|CYT_DCMP_DEAMINASES|PDOC00702| SEG 19->41|aaaldearlaeaagevpvgavvv| SEG 157->167|arrraqkaara| BL:PDB:NREP 1 BL:PDB:REP 43->155|1z3aA|9e-33|51.3|113/156| RP:PDB:NREP 1 RP:PDB:REP 43->155|2b3jD|2e-34|48.7|113/150| RP:PFM:NREP 1 RP:PFM:REP 43->111|PF00383|8e-14|47.1|68/100|dCMP_cyt_deam_1| HM:PFM:NREP 1 HM:PFM:REP 13->111|PF00383|7e-27|36.7|98/102|dCMP_cyt_deam_1| GO:PFM:NREP 2 GO:PFM GO:0008270|"GO:zinc ion binding"|PF00383|IPR002125| GO:PFM GO:0016787|"GO:hydrolase activity"|PF00383|IPR002125| RP:SCP:NREP 1 RP:SCP:REP 43->155|1wwrA1|2e-33|40.2|112/151|c.97.1.2| HM:SCP:REP 8->163|1z3aA1|1.8e-54|48.7|156/0|c.97.1.2|1/1|Cytidine deaminase-like| OP:NHOMO 1051 OP:NHOMOORG 907 OP:PATTERN -----------------------------1--------11111----1-2111--------------- 212-2-1211111112211-1111111111111---1111112111111111221111111121212221111111111111111111222211221--1111112112211111111111111211111111112----------123222111221111111111333111111111111111111111111111111121111111212222111111121111111131111111--1111111111111111221111111112211111211111111111111111-111111-1111111111111111111111111112222222222111111111121111111111111111111111--112111-11111121111121111111111111111-111112131111111111111111111111111111111111111111111112111111111111111111111111111111-111111111111121111111111111111121121211111111112211111111111111111111111111221121112212112111111111111111111--------------------1---1111111111111111111111122112111111-1211111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111122222222111111111111111111111222222111111222211111111111111111111111111111111111111111111111111111------------------1111--------------------------------222 ----11-----111-1-11---1-------111111-111-1111----1------------1----------2-------111-------------------1-1--5111--1-1-11--1-1-111121-1-1-11-1---1-2----1-2----1----1---1---321-11112111324456132111-11- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 146 STR:RPRED 77.2 SQ:SECSTR #########cHHHHHHHHHHHHHHHHHHHHTTccccEEEEEETTEEEEEEEccHHHHTcTTccHHHHHHHHHHHHHTccccTTcEEEEEEcccHHHHHHHHHHTccEEEEEEccTTTcTcTTcccGGGcTTcccccEEEccTTHHHHHHHHHHHH################################## DISOP:02AL 1-1,163-173,179-182,184-190| PSIPRED cccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccEEEEEEEcccccccccccHHHHHHHHHHHHHcccccccccEEEEEccccHHHHHHHHHccccEEEEEEccccccccccHHHHHHHcccccccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEccccccc //