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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08486.1
DDBJ      :             Alkylhydroperoxidase AhpD core
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  134/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.152.1
:179 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->169 2oyoA PDBj 9e-09 33.8 %
:RPS:PDB   4->177 3c1lC PDBj 3e-27 22.8 %
:RPS:SCOP  4->179 2oyoA1  a.152.1.3 * 2e-24 23.3 %
:HMM:SCOP  32->174 2o4dA1 a.152.1.3 * 3.9e-31 33.1 %
:RPS:PFM   59->103 PF02627 * CMD 2e-04 44.4 %
:HMM:PFM   50->106 PF02627 * CMD 2.1e-11 35.1 57/85  
:BLT:SWISS 24->103 Y4147_RALEH 9e-04 27.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08486.1 GT:GENE ABF08486.1 GT:PRODUCT Alkylhydroperoxidase AhpD core GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(1729890..1730429) GB:FROM 1729890 GB:TO 1730429 GB:DIRECTION - GB:PRODUCT Alkylhydroperoxidase AhpD core GB:PROTEIN_ID ABF08486.1 GB:DB_XREF GI:93354397 InterPro:IPR003779 InterPro:IPR004675 LENGTH 179 SQ:AASEQ MTTRLHTIAVQDATGQTAELFGALRGAIGKVPNAYATIGSNAPAVLAQALQTNAALKKGNLSARELEAINLSVSEHSGCDYCVAAHTLTGKMAGYTGDQMCQLRRGSYPEDAKIDALTRFAVELVSTRGTVPAASLEAIRAAGYSDGQIVEAIQAISAILFTNMINRVNDTTLDFPAVA GT:EXON 1|1-179:0| BL:SWS:NREP 1 BL:SWS:REP 24->103|Y4147_RALEH|9e-04|27.8|79/100| BL:PDB:NREP 1 BL:PDB:REP 4->169|2oyoA|9e-09|33.8|157/184| RP:PDB:NREP 1 RP:PDB:REP 4->177|3c1lC|3e-27|22.8|171/175| RP:PFM:NREP 1 RP:PFM:REP 59->103|PF02627|2e-04|44.4|45/83|CMD| HM:PFM:NREP 1 HM:PFM:REP 50->106|PF02627|2.1e-11|35.1|57/85|CMD| RP:SCP:NREP 1 RP:SCP:REP 4->179|2oyoA1|2e-24|23.3|176/186|a.152.1.3| HM:SCP:REP 32->174|2o4dA1|3.9e-31|33.1|139/0|a.152.1.3|1/1|AhpD-like| OP:NHOMO 166 OP:NHOMOORG 134 OP:PATTERN -------------------------------------------------------------------- --------------1---------1------1-----1------------------------1-1----1---------------------------------1-2--2---------------1---------------------2-1-------------------1---------------------------------------------------------------------------------------------------------------------11111111111111-------------1--111--------------------------------------------------------2----------1-11-12----------------------2--------------1---111-1--------1----------1--1------------------------------------1--11-1-2231-2----1123------223-122--11------1-51---3-1--1--1111111-----2----------------1--1-1----1--------------------------1---1-1--1-22111--------1111---1---1--1-1---------1--1--------------------------------121------------------------------------------------------1--1---1111-------1----------11---1111111--2121-----------------1--------1111--1-------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 176 STR:RPRED 98.3 SQ:SECSTR #TTcccccccccccHHHHHHHHHHHHHHccccHHHHHHTTcHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHHccHHHHHHHHGGGccccHHHHHHHHHHHHHHHcGGGccHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHHHHHHTcccGGTT## DISOP:02AL 179-180| PSIPRED cccccccccHHHccHHHHHHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc //