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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08501.1
DDBJ      :             4-aminobutyrate aminotransferase
Swiss-Prot:             

Homologs  Archaea  67/68 : Bacteria  792/915 : Eukaryota  190/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:420 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->415 1sffA PDBj e-135 56.2 %
:RPS:PDB   3->420 3du4A PDBj 9e-86 27.3 %
:RPS:SCOP  2->420 1sf2A  c.67.1.4 * 6e-99 54.9 %
:HMM:SCOP  1->421 1qj5A_ c.67.1.4 * 7.7e-133 45.2 %
:RPS:PFM   27->357 PF00202 * Aminotran_3 2e-80 50.0 %
:HMM:PFM   27->359 PF00202 * Aminotran_3 4e-117 45.7 328/339  
:BLT:SWISS 1->419 PUUE_ECOLI e-154 64.9 %
:PROS 235->272|PS00600|AA_TRANSFER_CLASS_3
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08501.1 GT:GENE ABF08501.1 GT:PRODUCT 4-aminobutyrate aminotransferase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1745040..1746302 GB:FROM 1745040 GB:TO 1746302 GB:DIRECTION + GB:PRODUCT 4-aminobutyrate aminotransferase GB:PROTEIN_ID ABF08501.1 GB:DB_XREF GI:93354412 InterPro:IPR004632 InterPro:IPR004839 InterPro:IPR005814 LENGTH 420 SQ:AASEQ MKNAELVRRKDAATPRGVGVMCNFYADRAENSEIWDVEGKRYIDFAAGIAVLNTGHRHPRLVAALQAQLNRFTHTAYQIVPYASYVELAEKINQRAPGRSARKTAFFTTGAEAVENAVKIARAATGRPGVIAFSGGFHGRTMMGMALTGKVAPYKTGFGPFPGEVFHAPYPSALHGVTVEDSRRALEHLFKADIDPRRVAAIIFEPVQGEGGFNVAPPEFVRMLRAVCDEHGILLVADEVQTGFGRTGKLFAMEHYDVAPDLTTMAKSLAGGMPLSAVCGRAEIMDAPAPGGLGGTYAGNPLAVASALAVLDVLESENLIARGAELGERLTARLNSLKPRVPQIAEVRGIGAMVAVEFRRADGSPDAEFTREVQNRALERGLLLLSCGVYGNVIRFLFPLTIQDAVMNEGLDILADVLTR GT:EXON 1|1-420:0| BL:SWS:NREP 1 BL:SWS:REP 1->419|PUUE_ECOLI|e-154|64.9|419/421| PROS 235->272|PS00600|AA_TRANSFER_CLASS_3|PDOC00519| SEG 302->314|lavasalavldvl| BL:PDB:NREP 1 BL:PDB:REP 3->415|1sffA|e-135|56.2|413/425| RP:PDB:NREP 1 RP:PDB:REP 3->420|3du4A|9e-86|27.3|410/447| RP:PFM:NREP 1 RP:PFM:REP 27->357|PF00202|2e-80|50.0|324/336|Aminotran_3| HM:PFM:NREP 1 HM:PFM:REP 27->359|PF00202|4e-117|45.7|328/339|Aminotran_3| GO:PFM:NREP 2 GO:PFM GO:0008483|"GO:transaminase activity"|PF00202|IPR005814| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00202|IPR005814| RP:SCP:NREP 1 RP:SCP:REP 2->420|1sf2A|6e-99|54.9|419/425|c.67.1.4| HM:SCP:REP 1->421|1qj5A_|7.7e-133|45.2|407/429|c.67.1.4|1/1|PLP-dependent transferases| OP:NHOMO 5753 OP:NHOMOORG 1049 OP:PATTERN 44221334555555541433333333342253222233333332232222343254523233228-46 49579434555342F7777-7C449H767778GBBB99FI69994544254584554522D6B3F6EEGE81111121-12263434423221322-115465768573711111112122222133333333333888A81117943432243333333333324475823433333333336554411-86AAAAAA9999B9A9998B88889BC8667744333333A936666665666666656646-------2---2222-----231111-------121------------------------2--111----36256-------2-262663111313--522442243443333332322263456661111185D7B574666647899789798A-456437386L72ECCDBAK99ECF6644259A99887AE44444444655234582222222222---------------2122214643BCCB9FIIFGGACCCAEEFHEEEE7CEED67762387A6983385A6CA763333485333333344447427676354446334333343355433336956412333333322322222224433333764365B344795555666555555565851-1555321-22277A83787776766677-7777766777767777776ACA8B9C366665666666666667653666632445555455555--2322222444445898444323322223223888876745487CDCDBIBG8IFFC7BGF422222222554445666668655657676744433333332553333------------------------------------1222212111643 11--443-1---11358756584A6B777444444455552444445568DBHC4765456355735994335475425576454535-46483448575464554-546A5757584525555973549e6-5663544745564445384345A6556BC4B575666K56455663*34366ACDI7887574959 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 420 STR:RPRED 100.0 SQ:SECSTR ccHHHHHHHHHHHcccTTccHHHHHHcEEEcTEEEETTccEEEETTHHHHTcccccccHHHHHHHHHHHTTcccccccccccHHHHHHHHHHHHHccTcTEEEEEEEccHHHHHHHHHHHHHHcTTccEEEEETTccccccHHHHHTccEcTTTccccGGGcccEEEEcccccTTccHHHHHHHHHHHHHHHHGGcGGEEEEEEccEEcTTTcEEccTTHHHHHHHHHHHTTcEEEEEcTTTTTTTTccccGGGGGTccccEEEEcGGGTTccccEEEEEEHHHHGGccccccccTTTTcHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTcTTEEEEEEETTEEEEEEcccTTTGGGcHHHHHHHHHHHTTEEcEEccEETTEEEEcccTTccHHHHHHHHHHHHHHHHH DISOP:02AL 1-2| PSIPRED ccHHHHHHHHHHHccccccccccEEEEEccccEEEEccccEEEEcHHHHHHHccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccccccEEEEccccHHHHHHHHHHHHHccccccEEEEEcccccccHHHHHHHcccHHHccccccccccEEEcccccccccccHHHHHHHHHHHHHHHcccccEEEEEEEccccccccEEccHHHHHHHHHHHHHHccEEEEcccccccccccccccHHHHcccccEEEEEHHHcccccEEEEEEcHHHHHHHccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccEEEEccccEEEEEEEEcccccccHHHHHHHHHHHHHccEEEEEccccccEEEEcccccccHHHHHHHHHHHHHHHcc //