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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08510.1
DDBJ      :             two component transcriptional regulator, winged helix family
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  864/915 : Eukaryota  58/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:230 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->219 2oqrA PDBj 1e-28 33.3 %
:RPS:PDB   1->52 2dvyD PDBj 9e-08 11.5 %
:RPS:PDB   24->103 3cwoX PDBj 1e-22 17.5 %
:RPS:PDB   127->222 2d1vA PDBj 7e-16 28.1 %
:RPS:SCOP  2->103 1p2fA2  c.23.1.1 * 2e-22 27.3 %
:RPS:SCOP  119->221 1ys6A1  a.4.6.1 * 6e-18 28.2 %
:HMM:SCOP  1->171 1s8nA_ c.23.1.1 * 1.1e-37 38.2 %
:HMM:SCOP  122->221 1kgsA1 a.4.6.1 * 3.1e-20 38.0 %
:RPS:PFM   3->103 PF00072 * Response_reg 7e-17 44.6 %
:RPS:PFM   148->218 PF00486 * Trans_reg_C 1e-09 39.4 %
:HMM:PFM   3->111 PF00072 * Response_reg 1.7e-28 38.5 109/112  
:HMM:PFM   146->218 PF00486 * Trans_reg_C 3e-19 37.0 73/77  
:BLT:SWISS 1->222 TCTD_SALTY 8e-55 56.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08510.1 GT:GENE ABF08510.1 GT:PRODUCT two component transcriptional regulator, winged helix family GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(1755747..1756439) GB:FROM 1755747 GB:TO 1756439 GB:DIRECTION - GB:PRODUCT two component transcriptional regulator, winged helix family GB:PROTEIN_ID ABF08510.1 GB:DB_XREF GI:93354421 InterPro:IPR001789 InterPro:IPR001867 LENGTH 230 SQ:AASEQ MRILLAEDNLKLAESLVDSLSQSGFAVDCMHDGASADHLLTTQDYALAILDIGMPRLDGLEVLRRLRQRRNPVPVLILTAHGSVEDRVRGLDLGADDYLAKPFALNELEARARALIRRSHGHDRTALECGPLRYDSVSRAFTLHGELLQLTGRERAVLEVLLMRDGRAVNKAALSEKIFGIDESVNADAIEIYVYRLRKKLEGSGVSIVTLRGLGYLLESRDTATSDARQ GT:EXON 1|1-230:0| BL:SWS:NREP 1 BL:SWS:REP 1->222|TCTD_SALTY|8e-55|56.6|221/224| SEG 104->118|alneleararalirr| BL:PDB:NREP 1 BL:PDB:REP 3->219|2oqrA|1e-28|33.3|216/226| RP:PDB:NREP 3 RP:PDB:REP 1->52|2dvyD|9e-08|11.5|52/214| RP:PDB:REP 24->103|3cwoX|1e-22|17.5|80/236| RP:PDB:REP 127->222|2d1vA|7e-16|28.1|96/103| RP:PFM:NREP 2 RP:PFM:REP 3->103|PF00072|7e-17|44.6|101/111|Response_reg| RP:PFM:REP 148->218|PF00486|1e-09|39.4|71/77|Trans_reg_C| HM:PFM:NREP 2 HM:PFM:REP 3->111|PF00072|1.7e-28|38.5|109/112|Response_reg| HM:PFM:REP 146->218|PF00486|3e-19|37.0|73/77|Trans_reg_C| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00486|IPR001867| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00486|IPR001867| GO:PFM GO:0003677|"GO:DNA binding"|PF00486|IPR001867| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00486|IPR001867| RP:SCP:NREP 2 RP:SCP:REP 2->103|1p2fA2|2e-22|27.3|99/120|c.23.1.1| RP:SCP:REP 119->221|1ys6A1|6e-18|28.2|103/106|a.4.6.1| HM:SCP:REP 1->171|1s8nA_|1.1e-37|38.2|170/190|c.23.1.1|1/1|CheY-like| HM:SCP:REP 122->221|1kgsA1|3.1e-20|38.0|100/0|a.4.6.1|1/1|C-terminal effector domain of the bipartite response regulators| OP:NHOMO 11705 OP:NHOMOORG 932 OP:PATTERN -----------------------------1----1---------1-1213422--------------- ALO5O466778545AAA99-9E448A999997FCCD8EGE9ADE8A576767BBD45711HFL5Q6GOKO7333354458HA91547777RJ-B22---53K579P9KBF1------1--1111132374448385QPPWUF7BW5fPWYNMBGHCD8669A8JNGDcdpD683555675545CE788232A7ESSTSTQSTHTRVVUPFH97BBSUb8CDV7FF98898AgV78888887888888868886A575BB645366666CC655665475DED866898877777777777555556666765575555455575QKJfOOOQRPRROJEbTT9CEAPIF89BHOB5fZPCA635768785427ILDJGGB66666IDPQQGCGHPHKNAA9AAAAA99F-IKMHMRJPDPF2SNNMLJLRRMMIFN8D9F9HKFKHEGDBBBBBBBBBDCA9NJC2222222222223433334334334222227CI77DFEBHTQTUWSNHHHDQQWUJHJICJVRUNVSZ23KQQSDNEDYMKOO5JRMFB9DJC1211111976IUoChfNBAcHBlXKJQ1ZUadTXbHMLPQPeaJSG7785555556333433333CK6BKBBNMBFHGM9HJCLGLMICILJKKJNKLNMOM--36B38------GFFHDGEHHHIHIIJGH-HJHGHHHHHJHHHHHGHHDMMNDG899FEFFFFFFEFFEFEFFLGEGGGGHB1EGGHHHHGHHHH--2D444445655CFTEP434323233333115BA89B6B899JCVSYUVeefMYccYNQOT2212132126EHHPFFFFFKOOPQPSGEIEFGGG66561-W366557722232333312-------------------------4B434656464Q3 ----12--------8-----12-1-11---------111--11-----11---2-----111-11-1--1--111------11111---111--111111321256--2-------------------------------------------------2----2-1-------4-1-1-------2--C---11C---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 229 STR:RPRED 99.6 SQ:SECSTR EHHTTcccccEEEEccGHHHHTcEEEEEccccccTTHHHHHHHccccEEEEcccTTccHHHHHHHHHHHcccccEEEEccccTHHHHHHHHHTTccEEEEcHHHccTTccEEEEEEcHHHHHHHGGGccGGGTTTHHHHHHHHHHHHHHHHHHcHHHHHHHTTTccccEEEEEccccHHHHHHTccccTTccTTHHHHHcccTTEEEHHHHHHHccccccTTTTHHHHH# DISOP:02AL 114-126,220-231| PSIPRED cEEEEEcccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHccccccEEEEEccccHHHHHHHHHccccccEEccccHHHHHHHHHHHHHHccccccccEEEccEEEEcccEEEEEccEEEcccHHHHHHHHHHHHcccccccHHHHHHHHcccccccccccHHHHHHHHHHHccccccEEEEEcccEEEEcccccccHHHcc //