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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08558.1
DDBJ      :             UspA
Swiss-Prot:             

Homologs  Archaea  40/68 : Bacteria  260/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
c.26.2
:146 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->141 1mjhB PDBj 4e-14 35.3 %
:RPS:PDB   1->146 2dumC PDBj 7e-23 22.7 %
:RPS:SCOP  1->141 1mjhA  c.26.2.4 * 3e-28 32.6 %
:HMM:SCOP  2->141 2gm3A1 c.26.2.4 * 1.2e-32 39.6 %
:RPS:PFM   3->141 PF00582 * Usp 8e-10 39.1 %
:HMM:PFM   1->141 PF00582 * Usp 1.3e-31 36.4 140/140  
:BLT:SWISS 1->141 Y531_METJA 2e-18 42.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08558.1 GT:GENE ABF08558.1 GT:PRODUCT UspA GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1815541..1815981 GB:FROM 1815541 GB:TO 1815981 GB:DIRECTION + GB:PRODUCT UspA GB:PROTEIN_ID ABF08558.1 GB:DB_XREF GI:93354469 InterPro:IPR006015 InterPro:IPR006016 LENGTH 146 SQ:AASEQ MYKKILLAVDDSDAAELALAQAVTVAKAMSAEVKALFVVTQALGSTLTPAEAATAAIGKRILEHVRSKMEANGLHYSTELLEEAGSAAGQIADTITSEANDWEADLIVMGTHGRRGIKRMVLGSVSEGVLTQSRIPVLVVRSDFED GT:EXON 1|1-146:0| BL:SWS:NREP 1 BL:SWS:REP 1->141|Y531_METJA|2e-18|42.5|134/170| BL:PDB:NREP 1 BL:PDB:REP 1->141|1mjhB|4e-14|35.3|133/144| RP:PDB:NREP 1 RP:PDB:REP 1->146|2dumC|7e-23|22.7|141/146| RP:PFM:NREP 1 RP:PFM:REP 3->141|PF00582|8e-10|39.1|133/139|Usp| HM:PFM:NREP 1 HM:PFM:REP 1->141|PF00582|1.3e-31|36.4|140/140|Usp| GO:PFM:NREP 1 GO:PFM GO:0006950|"GO:response to stress"|PF00582|IPR006016| RP:SCP:NREP 1 RP:SCP:REP 1->141|1mjhA|3e-28|32.6|135/143|c.26.2.4| HM:SCP:REP 2->141|2gm3A1|1.2e-32|39.6|134/0|c.26.2.4|1/1|Adenine nucleotide alpha hydrolases-like| OP:NHOMO 565 OP:NHOMOORG 304 OP:PATTERN ---1-14121122111---1----B4465476112121-----22111215AA1-------1-----1 1-1-------------------------------------------------------------------------------2------------------1-1-1--41---------------3123233221111123111-2331-1111-----------111------------------11---111111111111111111-2---1211111----111111--111111111111111112111111111-1-11-11112-2---111------------------------------------------------------------------------1---1--11----1---1----12----------111111-------22222222221---1-------1------------------------------------------------------------------------------------64464442221556B3233-33752586-1334--31324533-4-21---231111111111412-13--112111112----111---3443-3-1-------------------------11111--------111111111111---1111-----11--------------------------------------------------------------------------------------------------1--11-------------------22222-4------------------------------------1111111---1111-11------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------1--------------1-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 146 STR:RPRED 100.0 SQ:SECSTR cccEEEEEccccHHHHHHHHHHHHHccccccEEEEEEEEEGGcccccGGGGGGTHHHHHHHHHHHHHHHHHTTccEEEEEEEETTccEEcHHHHHHHHHHHHTccEEEEEccccccccTTcccHHHHHHHHHccccEEEEcccccc DISOP:02AL 143-147| PSIPRED cccEEEEEccccHHHHHHHHHHHHHHHHcccEEEEEEEEccHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEccccHHHHHHHHHHHccccEEEEEccccccHHHHcccHHHHHHHHHccccEEEEcccccc //