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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08567.1
DDBJ      :             RND efflux system, outer membrane lipoprotein, NodT
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  418/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
f.5.1
:516 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   74->484 1wp1A PDBj 5e-96 48.2 %
:RPS:PDB   42->484 3d5kA PDBj 5e-67 43.8 %
:RPS:SCOP  42->484 1wp1A  f.5.1.1 * 2e-66 43.8 %
:HMM:SCOP  12->491 1wp1A_ f.5.1.1 * 6.5e-103 35.5 %
:RPS:PFM   88->274 PF02321 * OEP 4e-08 29.4 %
:RPS:PFM   304->482 PF02321 * OEP 3e-09 30.2 %
:HMM:PFM   84->274 PF02321 * OEP 3.7e-24 28.3 184/188  
:HMM:PFM   302->482 PF02321 * OEP 1.3e-28 30.9 181/188  
:BLT:SWISS 29->484 OPRM_PSEAE 1e-96 45.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08567.1 GT:GENE ABF08567.1 GT:PRODUCT RND efflux system, outer membrane lipoprotein, NodT GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(1825603..1827153) GB:FROM 1825603 GB:TO 1827153 GB:DIRECTION - GB:PRODUCT RND efflux system, outer membrane lipoprotein, NodT GB:PROTEIN_ID ABF08567.1 GB:DB_XREF GI:93354478 InterPro:IPR003423 InterPro:IPR010131 LENGTH 516 SQ:AASEQ MEWLPRMSLAFARELLIKRQISRRGPAAALIVVPILLGGCISMDPAYERPAAPVRTTWSPDAAAPAITPAATIGWREFYADPELQALIGQALDNNRDLRIGAARVAQSLAAYGIQRAEQYPWIGASADGTRARVPGDLNLTGRPLISSQYQVGVGLSTWEIDFWGRIRSLKDAALQNYLASDAAQRAVTLSIITQVAQTYLAIRELDERIALAKQTTDTRAESLRIFTRREQVGSASKLELTEVITLYQQARALVTQLEQDRATQSHALEVLVGAPVDVKPAIGLVNDAELMRQIDAGLPSEQLENRPDIVSAEHQLMAENANIGAARAAFFPRVTLTGFAGTASADLDGLFRGGSGVWSFAPSISIPIFQGGQLRSNLDLAKARRVEAVAQYEKTIQNAFRDVADALSAQRWLAEQVDILQLTQAAQAERRRLAKLRYDNGAAAFLEVLDAERDLLAIEQQAVQSRRALLASRVSLYAALGGGTAVASPPEAAAPEGAPASAAPDAKPSTPSTAR GT:EXON 1|1-516:0| BL:SWS:NREP 1 BL:SWS:REP 29->484|OPRM_PSEAE|1e-96|45.7|455/485| SEG 62->73|aaapaitpaati| SEG 319->330|aenanigaaraa| SEG 486->515|avasppeaaapegapasaapdakpstpsta| BL:PDB:NREP 1 BL:PDB:REP 74->484|1wp1A|5e-96|48.2|411/456| RP:PDB:NREP 1 RP:PDB:REP 42->484|3d5kA|5e-67|43.8|443/454| RP:PFM:NREP 2 RP:PFM:REP 88->274|PF02321|4e-08|29.4|186/189|OEP| RP:PFM:REP 304->482|PF02321|3e-09|30.2|179/189|OEP| HM:PFM:NREP 2 HM:PFM:REP 84->274|PF02321|3.7e-24|28.3|184/188|OEP| HM:PFM:REP 302->482|PF02321|1.3e-28|30.9|181/188|OEP| GO:PFM:NREP 4 GO:PFM GO:0005215|"GO:transporter activity"|PF02321|IPR003423| GO:PFM GO:0006810|"GO:transport"|PF02321|IPR003423| GO:PFM GO:0005215|"GO:transporter activity"|PF02321|IPR003423| GO:PFM GO:0006810|"GO:transport"|PF02321|IPR003423| RP:SCP:NREP 1 RP:SCP:REP 42->484|1wp1A|2e-66|43.8|443/456|f.5.1.1| HM:SCP:REP 12->491|1wp1A_|6.5e-103|35.5|456/0|f.5.1.1|1/1|Outer membrane efflux proteins (OEP)| OP:NHOMO 1766 OP:NHOMOORG 421 OP:PATTERN -------------------------------------------------------------------- 435---------------------------------------------------------------------------------1--14455-7-----11711182614--------------312324121212------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------332B442-1111433453213512111-11111--1-11111113--312112211322-113331----------888888883GF84334--------------11-11-----------23A278763BKLMNMIH979AIHMQDDDD7BMGM8HDJ-29BD24666E753A27B73958671111111635453-38142411-133414323315791111--58221221111-2-1--------3--233225-312-43--11111114332-11223---111--------43121342454344633-444344434445333233265622---22212222221121124-133223--422222222222---2-----4634523-1222212111111112444342411161AACCACDB3B9B8567B111111111----211111-32--6785755333--------11--------------------------------------------------312 --------------------------------------------------------------------------------------------------------------------------------------------------------------2-----------------------------6-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 443 STR:RPRED 85.9 SQ:SECSTR #########################################ccccccccccccccccccccccccccccTTTccHHHHcccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHTTccccEEEEEEEEEEEcTTTccccccEEEEEEEEEEEEEEEEEcTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccccTTccccccTTcccccccccccGGGHHHHcHHHHHHHHHHHHHHHHHHHHHTTcccEEEEEEEEEEEEcccTTcccTTcEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcc################################ DISOP:02AL 1-1,10-22,134-144,491-517| PSIPRED cccccccccccccHHccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEEEEccccccccccccccccEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHccHHHHHHHHHHHHccccccHHHHHcccEEEEEEEEEEccccccccccccccEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccc //