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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08584.1
DDBJ      :             RND efflux system, outer membrane lipoprotein, NodT
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  432/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
f.5.1
:486 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   20->463 1wp1A PDBj 6e-73 38.9 %
:RPS:PDB   22->463 3d5kA PDBj 8e-70 35.1 %
:RPS:SCOP  20->463 1wp1A  f.5.1.1 * 2e-69 35.1 %
:HMM:SCOP  1->463 1wp1A_ f.5.1.1 * 1.8e-109 36.4 %
:RPS:PFM   67->253 PF02321 * OEP 2e-12 28.0 %
:RPS:PFM   282->434 PF02321 * OEP 2e-05 25.6 %
:HMM:PFM   63->253 PF02321 * OEP 1.1e-31 27.1 188/188  
:HMM:PFM   278->460 PF02321 * OEP 3.3e-26 28.4 183/188  
:BLT:SWISS 1->463 OPRM_PSEAE 2e-74 38.7 %
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08584.1 GT:GENE ABF08584.1 GT:PRODUCT RND efflux system, outer membrane lipoprotein, NodT GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1846301..1847761 GB:FROM 1846301 GB:TO 1847761 GB:DIRECTION + GB:PRODUCT RND efflux system, outer membrane lipoprotein, NodT GB:PROTEIN_ID ABF08584.1 GB:DB_XREF GI:93354495 InterPro:IPR003423 InterPro:IPR010131 LENGTH 486 SQ:AASEQ MKRRTVSRLMLLATLAAAGCAVGPDYVRPPVDVPQAYRFADEGISVPQTPATYWWSQMNDPVLDGLIATARANNKDLLIAAARVEEYYGRVMTTRSGLFPQVGIEAGGGRQRISTTNGTALPINNPFNQTHVAATASWEIDLFGRIRRLTEAAKADWQASELARRSTEISVVAATASAYITLRDLDNRLRISQETLESRRGALELFRERFQGGVVSEVEFAQARSEYASALTSVEQFRQQVALQEDLLAGLLGENPREIPRGKSISELTLPGVPVGLPSTLLEQRPDVLLAEQNLVAANARIGAARAEYFPTISLTGAFGAASTALSGLWTGPARAWSFAGLISMPIFTGGAIAGDVKQAEAIQTQSLQAYQQSIQTAFREVADALVSVQRTRDQLNAKTDQVDALGRYASLARDRYEGGYTSYLEVLDSERALFAAQLDQSTLIGSEFGQLVQLYKALGGGWPVESEAAQAPQASLSQPETRNKE GT:EXON 1|1-486:0| BL:SWS:NREP 1 BL:SWS:REP 1->463|OPRM_PSEAE|2e-74|38.7|457/485| COIL:NAA 23 COIL:NSEG 1 COIL:REGION 381->403| SEG 297->307|aanarigaara| SEG 464->481|pveseaaqapqaslsqpe| BL:PDB:NREP 1 BL:PDB:REP 20->463|1wp1A|6e-73|38.9|440/456| RP:PDB:NREP 1 RP:PDB:REP 22->463|3d5kA|8e-70|35.1|442/454| RP:PFM:NREP 2 RP:PFM:REP 67->253|PF02321|2e-12|28.0|186/189|OEP| RP:PFM:REP 282->434|PF02321|2e-05|25.6|153/189|OEP| HM:PFM:NREP 2 HM:PFM:REP 63->253|PF02321|1.1e-31|27.1|188/188|OEP| HM:PFM:REP 278->460|PF02321|3.3e-26|28.4|183/188|OEP| GO:PFM:NREP 4 GO:PFM GO:0005215|"GO:transporter activity"|PF02321|IPR003423| GO:PFM GO:0006810|"GO:transport"|PF02321|IPR003423| GO:PFM GO:0005215|"GO:transporter activity"|PF02321|IPR003423| GO:PFM GO:0006810|"GO:transport"|PF02321|IPR003423| RP:SCP:NREP 1 RP:SCP:REP 20->463|1wp1A|2e-69|35.1|444/456|f.5.1.1| HM:SCP:REP 1->463|1wp1A_|1.8e-109|36.4|439/0|f.5.1.1|1/1|Outer membrane efflux proteins (OEP)| OP:NHOMO 1891 OP:NHOMOORG 435 OP:PATTERN -------------------------------------------------------------------- 438---------------------------------------------------------------------------------1--14456-7-----217111A2614--------------324425232412------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------342C443-11114344543246332111111111-1-11111113--312112212332111335---1-------888888883GF84344--------------11-11-----------14B268763BKMONNIH98ABIHMQDDDD7BMHM9HDK-29BF2478AE863A27B73958761111111625453-39143421-1334132244157911121-37221221111-2-1--------3--2442251322133--11111114332-11223---111--------43121343455455744-455455545546444344365633---22212222221121123-224334--522222222222---2111115655624-2222212111111112444342411161AACCACDB4B9B8667B111111111----211111-52129896866333--------11-1------------------------------------------------312 --------------------------------------------------------------------------------------------------------------------------------------------------------------2-----------------------------5-----3---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 444 STR:RPRED 91.4 SQ:SECSTR ###################cccccccccccccccccccccTTcccccccccccHHHHcccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHTTccccEEEEEEEEEEEcTTTccccccEEEEEEEEEEEEEEEEEcTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccccTTcccccTTcccccccccccGGGHHHHcHHHHHHHHHHHHHHHHHHHHHTTcccEEEEEEEEEEEEcccTTcccTTcEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccc####################### DISOP:02AL 1-4,39-47,112-125,470-487| PSIPRED ccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEEEcccccccccccccccccEEEEEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHccccccccccccccccccHHHHHHHccHHHHHHHHHHHHHccHHHHHHHHcccEEEEEEEEEEccccccccccccccEEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHcccccccccccccccc //