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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08598.1
DDBJ      :             Taurine catabolism dioxygenase TauD/TfdA
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  210/915 : Eukaryota  85/199 : Viruses  0/175   --->[See Alignment]
b.82.2
:282 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->282 1gy9B PDBj 2e-44 40.1 %
:RPS:PDB   2->282 3eatX PDBj 7e-44 17.0 %
:RPS:SCOP  1->282 1gqwA  b.82.2.5 * 5e-69 40.6 %
:HMM:SCOP  1->282 1gy9A_ b.82.2.5 * 7.9e-83 41.8 %
:RPS:PFM   22->274 PF02668 * TauD 8e-31 41.0 %
:HMM:PFM   2->273 PF02668 * TauD 5.6e-53 33.3 243/255  
:BLT:SWISS 1->282 TAUD_ECOLI 1e-43 41.4 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08598.1 GT:GENE ABF08598.1 GT:PRODUCT Taurine catabolism dioxygenase TauD/TfdA GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1858702..1859550 GB:FROM 1858702 GB:TO 1859550 GB:DIRECTION + GB:PRODUCT Taurine catabolism dioxygenase TauD/TfdA GB:PROTEIN_ID ABF08598.1 GB:DB_XREF GI:93354509 InterPro:IPR003819 LENGTH 282 SQ:AASEQ MQVKPLTCAIGAELVGVNLADAIKSDDLFAEIRAQLLKHRVVFLRDQTFSRAEHVAFARRFGELEDHPVAGSDPEHPGLVRIYKSPDQPNDRYENAWHSDTTWREAPQFGAVLRCVECPPVGGDTMWANMALAYENLPDHIKSQIADLRARHSIEASFGAVMPIEKRLALKERYPDAEHPVVRTHPDTGEKILYVNAFTTHFTNYHTPARVRFGQDGNPGATDLLRYLISQAYIPEYQVRWRWQPNSVAIWDNTATQHYAVMDYPPCYRKMERAGIIGSVPF GT:EXON 1|1-282:0| BL:SWS:NREP 1 BL:SWS:REP 1->282|TAUD_ECOLI|1e-43|41.4|263/283| BL:PDB:NREP 1 BL:PDB:REP 1->282|1gy9B|2e-44|40.1|267/275| RP:PDB:NREP 1 RP:PDB:REP 2->282|3eatX|7e-44|17.0|247/278| RP:PFM:NREP 1 RP:PFM:REP 22->274|PF02668|8e-31|41.0|234/258|TauD| HM:PFM:NREP 1 HM:PFM:REP 2->273|PF02668|5.6e-53|33.3|243/255|TauD| GO:PFM:NREP 2 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF02668|IPR003819| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02668|IPR003819| RP:SCP:NREP 1 RP:SCP:REP 1->282|1gqwA|5e-69|40.6|266/277|b.82.2.5| HM:SCP:REP 1->282|1gy9A_|7.9e-83|41.8|268/0|b.82.2.5|1/1|Clavaminate synthase-like| OP:NHOMO 796 OP:NHOMOORG 295 OP:PATTERN -------------------------------------------------------------------- ----3---------33311-12--1311111112222654-41F--------111--1------212422------------------------------------------------------------------------------------------------12-21-------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------3--2-----2-335---------------------------1-17-----11--21---112-----1---1-11111111-11-----------------------------------3271--432333444324442332377651331A6CA7--1111---14---31-1-----2-------------------------------------------3-----------------------------1------------------------------------------12---111111111111-1111111111111111111111--11-----------------11111111--111111111111---------------------------------11111-2---7-44344343-3433-233-------------------1-111--11111111--------------------------------------------------------------- --------------353739785A8A811----1-1----------776763B44614433463512-15--51911111155543-2-6B4384244653-1452--6-1----------------------------------------------------1--------------1----11---15--1-43651 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 282 STR:RPRED 100.0 SQ:SECSTR ccTTcccccccEEEEEccTTccGcGGccHHHHHHHHHHHcEEEEccccccHHHHHHHHHHHccccccTTcccEEEEEcTTcccTTTcTTcccccEEEEcTTTTccEEEEEEEEEEEEcccccccEEEEEHHHHHHHccHHHHHHHHHcEEEEEccGGGcccGccHHHHHHHccccEEEEEcEEEcTTTccEEEcccccccEEEEcccTTTHHTcccccHHHHHHHHHHHHHHTcTTTEEEEcccTTcEEEEETTTEEEEEccccccccEEEEEEEEEEEEEE DISOP:02AL 279-280| PSIPRED cEEEEcccccccEEEccccccccccHHHHHHHHHHHHHccEEEEccccccHHHHHHHHHHHcccccccccccccccccEEEEEccccccccccccccccccccccccccEEEEEEEcccccccccEEEcHHHHHHHccHHHHHHHcccEEEEEEcccHHHcccccccHHHHHHcccEEccEEEEccccccEEEEEcccEEEEccccccHHHEEcccccHHHHHHHHHHHHHHccccEEEEEEcccccEEEEEcccHHcccccccccccEEEEEEEEEEcccc //