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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08612.1
DDBJ      :             porin, Gram-negative type
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  55/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
f.4.3
:398 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   21->398 2fgrA PDBj 2e-14 30.3 %
:RPS:PDB   15->372 1bt9A PDBj 3e-29 14.0 %
:RPS:SCOP  22->398 1e54A  f.4.3.1 * 2e-43 27.9 %
:HMM:SCOP  14->398 1hxxA_ f.4.3.1 * 1.3e-75 38.4 %
:RPS:PFM   76->357 PF00267 * Porin_1 7e-15 37.6 %
:HMM:PFM   65->355 PF00267 * Porin_1 2.1e-11 18.8 277/336  
:BLT:SWISS 21->365 OMP_BORPE 2e-21 30.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08612.1 GT:GENE ABF08612.1 GT:PRODUCT porin, Gram-negative type GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(1877665..1878861) GB:FROM 1877665 GB:TO 1878861 GB:DIRECTION - GB:PRODUCT porin, Gram-negative type GB:PROTEIN_ID ABF08612.1 GB:DB_XREF GI:93354523 InterPro:IPR001702 InterPro:IPR002299 LENGTH 398 SQ:AASEQ MKLKGMAMAALLACTGSAYAQSAVTLYGVLDTSLEFANHVAPYSAAGFTANPGAGNNVFRVNSGGLSGSRWGLRGTEDLGGGLKSIFVLESGISVDNGTMQQSNRLFGRQAFVGISHNTYGQITLGRQYTSLFVAMANFMPTAYATQYEPAAFMAGNNFREDNTIAYTGVFGPVTALAHFSFGAGVPNLAIQGGASAFGGNGEVPGAFRRDSAFGGAFTYSAGPFGAAIAYDQWNPSVNNAAGVYQGTTATLKKASVAGSYAIGQVAKIMAGYRWGKVDNNGTGAQLQRDDYYWIGANYQVTPAVGLTLEYDYDNLKRDYFNNTHAPNPWQIAFVADYSFSKRTDVYLSAAYAKNAGLTLDAANTNQLATTGATGNSYILGTGQSSMVGVSLGLRHKF GT:EXON 1|1-398:0| BL:SWS:NREP 1 BL:SWS:REP 21->365|OMP_BORPE|2e-21|30.0|327/385| SEG 1->13|mklkgmamaalla| SEG 63->75|sgglsgsrwglrg| BL:PDB:NREP 1 BL:PDB:REP 21->398|2fgrA|2e-14|30.3|323/332| RP:PDB:NREP 1 RP:PDB:REP 15->372|1bt9A|3e-29|14.0|328/340| RP:PFM:NREP 1 RP:PFM:REP 76->357|PF00267|7e-15|37.6|255/306|Porin_1| HM:PFM:NREP 1 HM:PFM:REP 65->355|PF00267|2.1e-11|18.8|277/336|Porin_1| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00267|IPR001702| GO:PFM GO:0006810|"GO:transport"|PF00267|IPR001702| GO:PFM GO:0016020|"GO:membrane"|PF00267|IPR001702| RP:SCP:NREP 1 RP:SCP:REP 22->398|1e54A|2e-43|27.9|323/332|f.4.3.1| HM:SCP:REP 14->398|1hxxA_|1.3e-75|38.4|328/0|f.4.3.1|1/1|Porins| OP:NHOMO 1058 OP:NHOMOORG 57 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------35536ZehfcdQNKLGccldTSROBQ*U*EWMR--GFH-5522B43324332-----2----------12-------------------------11-1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------2-----------------------------6---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 384 STR:RPRED 96.5 SQ:SECSTR ##############EEEEETTEEEEEEEEEEEEEEEcccccTTcccccEEccEEEEEEEEEEETccccEEEEEEEEEEEETTEEEEEEEEEEEEccccccTTTTTcEEEEEEEEEEETTTEEEEEEEEEcTTHHHHGGGccccccccTTccTTcTTccEEEEEEEEEEEHHHHTcTTEEEEEEEEETcEEEEEEEEEEcccccccGGGccccEEEEEEEEEETTEEEEEEEEEEEccHHHHTcccEccccEEEEEEEEEEEEETTEEEEEEEEEEEEETTTTEEEEccEEEEEEEEEEEccTTcEEEEEEEEEEEEEEETETTEEEEEEEEEEEEEEEEccccEEEEEEEEEEcccTTcTTccccccEEEEEccTTEEEEEEEEcEEEEEEEEEEEEc DISOP:02AL 1-6,48-58| PSIPRED ccccHHHHHHHHHHHHHHHHccccEEEEEEEEEEEEEEccccccccEEEEcccccccEEEEcccccccccccccEEEEccccEEEEEEEEEEEEEcccccccccccEEEEEEEEEccccEEEEEEcccccEEEEEEEccccccccccccccccccccccccccEEEEEccccccEEEEEEEEcccccccccccccEEEccccccccccccccEEEEEEEEEcccEEEEEEEEEEcccccccccccccccccEEEEEEEEEEEcccEEEEEEEEEEEEEcccccccccccEEEEEEEEEEEEcccEEEEEEEEEEEEcccccccccccccEEEEEEEEEEccccEEEEEEEEEEEEcccccccccccccccccccccccccccccccEEEEEEEEEEcc //