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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08616.1
DDBJ      :             RND efflux system, outer membrane lipoprotein, NodT
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  405/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
f.5.1
:497 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   27->489 1wp1A PDBj e-112 50.9 %
:RPS:PDB   28->489 3d5kA PDBj 1e-66 49.7 %
:RPS:SCOP  27->489 1wp1A  f.5.1.1 * 7e-65 49.1 %
:HMM:SCOP  1->490 1wp1A_ f.5.1.1 * 1e-97 34.7 %
:RPS:PFM   87->273 PF02321 * OEP 5e-10 26.9 %
:RPS:PFM   304->481 PF02321 * OEP 5e-08 26.9 %
:HMM:PFM   84->273 PF02321 * OEP 9.8e-27 25.7 187/188  
:HMM:PFM   302->481 PF02321 * OEP 1.1e-30 26.1 180/188  
:BLT:SWISS 27->485 OPRM_PSEAE e-109 50.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08616.1 GT:GENE ABF08616.1 GT:PRODUCT RND efflux system, outer membrane lipoprotein, NodT GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(1881726..1883219) GB:FROM 1881726 GB:TO 1883219 GB:DIRECTION - GB:PRODUCT RND efflux system, outer membrane lipoprotein, NodT GB:PROTEIN_ID ABF08616.1 GB:DB_XREF GI:93354527 InterPro:IPR003423 InterPro:IPR010131 LENGTH 497 SQ:AASEQ MKRKPTSLIRPPRWTPALLVPLALAACSLEPTYQRPESPVPQAYPTGPAYESANKGPAGQARPDQATPAASLGWEDFFTDPRLRTLIGLALANNRDLRIATLSIDQARAQYRIQRAAQFPAINANAGFASTRLNSDLRAPGQDAVINSWTAGVGFNAFELDVFGRVRSLKHQALEQYLAIEEVRRSAQISLVAEVASAYLTWQADQELLRLSKETLKVQQDAALMISRSKSAGGMAEIDMHRGQTQVQTAQVDVEQFTRQVAQDENALALLIGGQLPADLPPPQPFANNSYVAELPAGVPSTLMEQRPDIMAAEHQLKGANANIGAARAAFFPQISLTATVGVASTALASLFTGGMAWAFAPQITLPIFNAGANQARLDIATVQKDINVAAYEKTIQGAFREVADGLAARGTYDRQTVAQEALTKEVSETKRLAEIRFKNGVDDYFPVFDAQRQLYDAQKKMVTIELARLTSRASLYKALGGGWSQQTVASLDHPAK GT:EXON 1|1-497:0| BL:SWS:NREP 1 BL:SWS:REP 27->485|OPRM_PSEAE|e-109|50.4|450/485| SEG 16->26|pallvplalaa| SEG 106->118|qaraqyriqraaq| SEG 319->330|gananigaaraa| BL:PDB:NREP 1 BL:PDB:REP 27->489|1wp1A|e-112|50.9|454/456| RP:PDB:NREP 1 RP:PDB:REP 28->489|3d5kA|1e-66|49.7|453/454| RP:PFM:NREP 2 RP:PFM:REP 87->273|PF02321|5e-10|26.9|186/189|OEP| RP:PFM:REP 304->481|PF02321|5e-08|26.9|178/189|OEP| HM:PFM:NREP 2 HM:PFM:REP 84->273|PF02321|9.8e-27|25.7|187/188|OEP| HM:PFM:REP 302->481|PF02321|1.1e-30|26.1|180/188|OEP| GO:PFM:NREP 4 GO:PFM GO:0005215|"GO:transporter activity"|PF02321|IPR003423| GO:PFM GO:0006810|"GO:transport"|PF02321|IPR003423| GO:PFM GO:0005215|"GO:transporter activity"|PF02321|IPR003423| GO:PFM GO:0006810|"GO:transport"|PF02321|IPR003423| RP:SCP:NREP 1 RP:SCP:REP 27->489|1wp1A|7e-65|49.1|454/456|f.5.1.1| HM:SCP:REP 1->490|1wp1A_|1e-97|34.7|453/0|f.5.1.1|1/1|Outer membrane efflux proteins (OEP)| OP:NHOMO 1738 OP:NHOMOORG 408 OP:PATTERN -------------------------------------------------------------------- 435---------------------------------------------------------------------------------1--14455-6-----21711182614--------------312213121211------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------331B222-11114334532135121----------1-11111113--312112211332--1333-----------888888883GF84324--------------11--1-----------13A268763BKMONOIGBBDDGGMPFFFF7DMFL9GDJ-29BD24778C753827B73958771111111625443-28142421-133413213214781112--3722-221111-1-1--------3--244225-3-2-32--11111114332-11223---111--------43121332454344633-444344434445333233265622---22212222221121123-133223--311111111111---2-----5655623-1111112-1111111244434241116199CBACDB4B9B8667B111111111----211111-31--7775755333--------11--------------------------------------------------312 --------------------------------------------------------------------------------------------------------------------------------------------------------------2-----------------------------6-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 463 STR:RPRED 93.2 SQ:SECSTR ##########################cccccccccccccccccccccTTccc#cccccccccccccccTTTccHHHHcccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHTTccccEEEEEEEEEEEcTTTccccccEEEEEEEEEEEEEEEEEcTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccccTTccccccTTTcccccccccccGGGHHHHcHHHHHHHHHHHHHHHHHHHHHTTcccEEEEEEEEEEEEcccTTcccTcEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccccccccH####### DISOP:02AL 1-9,131-144,485-498| PSIPRED cccccccccccccccHHHHHHHHHHHHcccccccccccccHHHccccccccccccccccccccccccccccccHHHHHccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEcccccccccccccccEEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHccHHHHHHHHHHHcccccccHHHHHcccEEEEEEEEEEcccccccccccccEEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccc //