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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08630.1
DDBJ      :             two component heavy metal response transcriptional regulator, winged helix family
Swiss-Prot:             

Homologs  Archaea  15/68 : Bacteria  854/915 : Eukaryota  29/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:224 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->220 2oqrA PDBj 2e-32 36.2 %
:RPS:PDB   1->217 3c3wB PDBj 2e-26 17.6 %
:RPS:SCOP  1->106 1a0oA  c.23.1.1 * 6e-26 34.0 %
:RPS:SCOP  138->220 1ys6A1  a.4.6.1 * 2e-24 47.0 %
:HMM:SCOP  1->186 1s8nA_ c.23.1.1 * 9.8e-40 34.4 %
:RPS:PFM   3->102 PF00072 * Response_reg 1e-17 44.0 %
:RPS:PFM   144->219 PF00486 * Trans_reg_C 9e-12 46.1 %
:HMM:PFM   3->110 PF00072 * Response_reg 3.6e-29 38.9 108/112  
:HMM:PFM   146->219 PF00486 * Trans_reg_C 9.8e-29 48.6 74/77  
:BLT:SWISS 1->224 IRLR_BURPS 2e-67 56.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08630.1 GT:GENE ABF08630.1 GT:PRODUCT two component heavy metal response transcriptional regulator, winged helix family GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1900803..1901477 GB:FROM 1900803 GB:TO 1901477 GB:DIRECTION + GB:PRODUCT two component heavy metal response transcriptional regulator, winged helix family GB:PROTEIN_ID ABF08630.1 GB:DB_XREF GI:93354541 InterPro:IPR001789 InterPro:IPR001867 InterPro:IPR006291 LENGTH 224 SQ:AASEQ MKILVIEDEPKTGEYLRKGLTESSFVVDLASTGRDGLHHAIDGDYDLVILDVMLPGMNGWEVLKELREHKDTPVLFLTARDEVEDRVKGLELGGDDYLAKPFAFVELLARARTLLRRGPTREAERIEIEDLEIDLLRHRVSRGGIRIDLSPREFALLHFLARRHGEVLSRTQIASHVWDMNFDSDTNVVDVAIRRLRAKMDDTYAPKLIHSVRGIGYVLENRQS GT:EXON 1|1-224:0| BL:SWS:NREP 1 BL:SWS:REP 1->224|IRLR_BURPS|2e-67|56.7|224/229| SEG 107->117|llarartllrr| SEG 121->137|reaerieiedleidllr| BL:PDB:NREP 1 BL:PDB:REP 3->220|2oqrA|2e-32|36.2|218/226| RP:PDB:NREP 1 RP:PDB:REP 1->217|3c3wB|2e-26|17.6|205/210| RP:PFM:NREP 2 RP:PFM:REP 3->102|PF00072|1e-17|44.0|100/111|Response_reg| RP:PFM:REP 144->219|PF00486|9e-12|46.1|76/77|Trans_reg_C| HM:PFM:NREP 2 HM:PFM:REP 3->110|PF00072|3.6e-29|38.9|108/112|Response_reg| HM:PFM:REP 146->219|PF00486|9.8e-29|48.6|74/77|Trans_reg_C| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00486|IPR001867| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00486|IPR001867| GO:PFM GO:0003677|"GO:DNA binding"|PF00486|IPR001867| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00486|IPR001867| RP:SCP:NREP 2 RP:SCP:REP 1->106|1a0oA|6e-26|34.0|106/128|c.23.1.1| RP:SCP:REP 138->220|1ys6A1|2e-24|47.0|83/106|a.4.6.1| HM:SCP:REP 1->186|1s8nA_|9.8e-40|34.4|186/190|c.23.1.1|1/1|CheY-like| OP:NHOMO 11476 OP:NHOMOORG 898 OP:PATTERN -----------------------------1-----1--1111123-1B-9525--------------- 9JR7P456667555BBBAA-AG44BBAAAAA9HDEEAEHE8CEG99577898ACE45711HEI5M7FOLO7444465557GB7-5668FFXN-C22---65M6C9W8TBK1------1-11111132233434362TWWVRG6Cf5pSfaRQDHFGH8779A8NOGGjoxH574555665544DD79A45197GUUVUVSTUHVSWWVRGIFDCFUUc9BDX7FF988A8Aea889888878888888788768675BB655466655BA555575575DED766899977788788787555556667765697766476776PKKdNNNSRSUROMDZTT8CEAPIH78CGMA4aYQGC545977677128HD9GEEC55555FBPJNEBBEMFHMAA9AAAAA99C-JLNIKNLOAK91MHHMIFOQPJKIEMAC9D9FG8FEBBBBBBBBBBB6BA89NDD2232333322223333333333323212235CF56CGFCJRRURVPKGGGCOOTUHFHH9JSRRLROW12KQOYFJGEbJLON9GKJDC9BH61211111A85GRoGZYLAAU87YVCCH-dTaTRTcILGDGFScJOI9796555557131211211BH7EG77KJ9JHIKAKHGMFLJIEJGOLLHKJGLJRU--44979------GEGHCI9IHHJIJJKGI-HKIGIHIGIIHIIIIHIIEIFICF779GEGGGGGGFFGFGFGGHFEFGGGH8-CEEEEEEEFEEE--2D3433345459IaDP434333244443115DCBBE9D999HLSRVSQaZaHVXYXKTPU2212132127DIJLFFFFFJLMNNNPHEJEFEEE5545--Y2BB88881-------412-------------------------58244646564J3 ----32--------3------------------------------------11---1-----------------------------1-------1-212--2-112----------------------------------------------------2----2-1-------3-1321----1-4--C--12-B---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 223 STR:RPRED 99.6 SQ:SECSTR EEEEEEcccHHHHHHHHHHHHTcTEEEEEEccHHHHHHHHHHHcccEEEEccEETTEEHHHHHHHHHHcTTcEEEEGGGcccHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHGGGccHHHHHHHHHHHHHHHHHHHHccTTTTccHHHHHHHHHHTTTccHcEEEEEcHHHHHHHHHTccHHHHHHHHHHHHHHTTcccccHHHHHHHHHTcTEcccc# DISOP:02AL 114-125,221-225| PSIPRED cEEEEEcccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHcccccEEEEEccccHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHcccccccEEEEEHHcEEEEEEEEEEEccEEEcccHHHHHHHHHHHHcccccccHHHHHHHHcccccccccccHHHHHHHHHHHccccccccEEEEEcccEEEEccccc //