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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08634.1
DDBJ      :             Twin-arginine translocation pathway signal
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  136/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
a.288.1c.24.1e.26.1
:332 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   34->329 2qpqA PDBj 9e-52 37.3 %
:RPS:PDB   32->331 2dvzA PDBj 2e-54 32.4 %
:RPS:SCOP  32->91 1jqkA  e.26.1.2 * 6e-13 15.0 %
:RPS:SCOP  240->331 2o70A1  a.288.1.1 * 1e-15 7.7 %
:HMM:SCOP  125->225 1vmdA_ c.24.1.2 * 3.1e-06 28.0 %
:RPS:PFM   54->325 PF03401 * Bug 2e-48 43.1 %
:HMM:PFM   54->329 PF03401 * Bug 9.1e-77 37.4 273/274  
:HMM:PFM   6->29 PF10518 * TAT_signal 6.5e-08 58.3 24/26  
:BLT:SWISS 33->324 YCLC_PSEPU 8e-43 32.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08634.1 GT:GENE ABF08634.1 GT:PRODUCT Twin-arginine translocation pathway signal GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(1904452..1905450) GB:FROM 1904452 GB:TO 1905450 GB:DIRECTION - GB:PRODUCT Twin-arginine translocation pathway signal GB:PROTEIN_ID ABF08634.1 GB:DB_XREF GI:93354545 InterPro:IPR005064 InterPro:IPR006311 LENGTH 332 SQ:AASEQ MTKLLISRRQVLKAGAAASMAAVMPSVLAKTGWPDKFIKMVVAFPAGGPTDTAARIVAQKLSGRLGQQVIIENKPGASGSIGTASFIRSPADGYNLSMFGMPALLAPLMYKTNAYDVKKDFLSVATVYVLPMAIVINPAVVPHVETLPDLIRFAKASKTPLSYTSSGTGSFGHLAMEQLKDLGGFDVLHVPYRGSAPAVADLLGGQVGIMFADVVAALPHIRAGKLKAIALSSPNARVLLPGVKTVSEQGFPGFDFDSWGGLIAPLDTPQPIVDRIASETRDIIGKDKELQQKLVSAGAIASFQDGKEMQARLNKDYDRWSAIVKAKGISAS GT:EXON 1|1-332:0| BL:SWS:NREP 1 BL:SWS:REP 33->324|YCLC_PSEPU|8e-43|32.9|289/329| SEG 14->29|agaaasmaavmpsvla| BL:PDB:NREP 1 BL:PDB:REP 34->329|2qpqA|9e-52|37.3|292/296| RP:PDB:NREP 1 RP:PDB:REP 32->331|2dvzA|2e-54|32.4|290/292| RP:PFM:NREP 1 RP:PFM:REP 54->325|PF03401|2e-48|43.1|269/274|Bug| HM:PFM:NREP 2 HM:PFM:REP 54->329|PF03401|9.1e-77|37.4|273/274|Bug| HM:PFM:REP 6->29|PF10518|6.5e-08|58.3|24/26|TAT_signal| GO:PFM:NREP 1 GO:PFM GO:0030288|"GO:outer membrane-bounded periplasmic space"|PF03401|IPR005064| RP:SCP:NREP 2 RP:SCP:REP 32->91|1jqkA|6e-13|15.0|60/610|e.26.1.2| RP:SCP:REP 240->331|2o70A1|1e-15|7.7|91/165|a.288.1.1| HM:SCP:REP 125->225|1vmdA_|3.1e-06|28.0|100/156|c.24.1.2|1/1|Methylglyoxal synthase-like| OP:NHOMO 2163 OP:NHOMOORG 141 OP:PATTERN -------------------------------------------------------------------- -------------------------1-------------1-------------11---------11--111-----------------------------------------------------------------1----------------------------------------------41---11-------------------5111-------113--------1--------------------------------------------------------------------------------------------5---------------------1----1----44-----1-------1---------------W45--573875----------2-21111---D---14423355223441---4353-352-2--------------1------------------------------------R****-----------------------C****9G322K6skj*d*3**361-----------------1-----2-1-1----1----------1111-------------------------------------------1111----11-------------------------------1-111-------111-1--1-11-113-------1------------------------------------------------------55-----2--------1----------2---------1-------------------------------1--1---------------------------------------------------------------4------ -------------1------------------------------------------------------------------------------------------------------------------------------------------------L--------------1-----------1--q---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 300 STR:RPRED 90.4 SQ:SECSTR ###############################ccccccEEEEEcccTTcHHHHHHHHHHHHHHHHTTTccEEEEcccGGGHHHHHHHHHccTTccEEEEEcHHHHHHHHcTTTccccTTTcEEEEEEEEEEcEEEEEcTTcHHccccHHHHHHHHHTcTTTcEEEEccTTcHHHHHHHHHHHHHTcccEEEEcccHHHHHHHHHHTcccEEEEEGHHHHHHHHTTccEEEEEEcccccGGGTTcccTTTTTcGGGcccEEEEEEEETTccHHHHHHHHHHHHHHHHTcHHHHHHHHHHTEEEccccHHHHHHHHHHHHHHHHHHHHcTTccc# DISOP:02AL 1-1,332-333| PSIPRED cccccccHHHHHHcccHHHHHHHHHHHHHHcccccccEEEEEccccccHHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHcccccccEEEEEccHHHHHHHHcccccccHHHHHHHHHHHHcccEEEEEccccccccccHHHHHHHHHHccccEEEcccccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHcccccEEEccHHHHHHHHHcccEEEEEEEcccccHHccccccHHHcccccEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHccHHHHHHHHHcccEEccccHHHHHHHHHHHHHHHHHHHHHcccccc //