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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08669.1
DDBJ      :             FAD linked oxidase-like protein
Swiss-Prot:             

Homologs  Archaea  40/68 : Bacteria  565/915 : Eukaryota  186/199 : Viruses  0/175   --->[See Alignment]
d.145.1d.58.32
:470 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   35->243 2uuuC PDBj 4e-13 25.9 %
:RPS:PDB   6->470 1e8gA PDBj 2e-69 16.4 %
:RPS:SCOP  15->217 1i19A2  d.145.1.1 * 9e-39 21.3 %
:RPS:SCOP  221->470 1f0xA1  d.58.32.2 * 8e-32 15.8 %
:HMM:SCOP  3->219 1f0xA2 d.145.1.1 * 4.6e-74 50.5 %
:HMM:SCOP  222->470 1e8gA1 d.58.32.1 * 1.4e-56 35.9 %
:RPS:PFM   41->178 PF01565 * FAD_binding_4 2e-19 42.2 %
:RPS:PFM   220->468 PF02913 * FAD-oxidase_C 2e-19 34.3 %
:HMM:PFM   221->469 PF02913 * FAD-oxidase_C 6.5e-52 29.5 241/249  
:HMM:PFM   41->180 PF01565 * FAD_binding_4 3.4e-39 39.0 136/138  
:BLT:SWISS 12->470 D2HDH_BOVIN 1e-79 39.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08669.1 GT:GENE ABF08669.1 GT:PRODUCT FAD linked oxidase-like protein GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1941480..1942892 GB:FROM 1941480 GB:TO 1942892 GB:DIRECTION + GB:PRODUCT FAD linked oxidase-like protein GB:PROTEIN_ID ABF08669.1 GB:DB_XREF GI:93354580 InterPro:IPR004113 InterPro:IPR006094 LENGTH 470 SQ:AASEQ MSDTNFAQRLTETLGPDVVTTAPDDVAPWLSDWRGLYKGQAQAVIRPRTTEQVAQALALCQQAGVPVVPRGGNTGLCGGAAPDGNQTNVVLSLDRMDKIRSIDTIANTMVVEAGCILGNLRRAAEDADRLFPLSLAAEDSCQIGGNLATNAGGVNVVRYGMTRELVLGVEAVLPNGEIFHGLRTLRKDNTGYDLKQLLIGSEGTLGIITAAALRLLPRADSRAVVLAAVESPKQALELFSLLFARCGARLQAYEFFTGACLDLVLTHVEGIHAPFAERYPAYVLVEIADTAPEDVLNALLESVIGDALEQGLCLDAAVSASLAQLQSLWRLREEISEAQRADGLHLKHDVSLPIEAIPDFMTSMETRLAARHPGVRPFIFGHFGDGNLHYNLSRPLGADPKWALNEGKAVSEDVLEEVARYDGSISAEHGIGQLKRESFLALKDPLELRLMRAIKQVFDPSGIMNPGKLL GT:EXON 1|1-470:0| BL:SWS:NREP 1 BL:SWS:REP 12->470|D2HDH_BOVIN|1e-79|39.3|443/544| SEG 52->63|qvaqalalcqqa| SEG 314->328|ldaavsaslaqlqsl| BL:PDB:NREP 1 BL:PDB:REP 35->243|2uuuC|4e-13|25.9|189/541| RP:PDB:NREP 1 RP:PDB:REP 6->470|1e8gA|2e-69|16.4|463/550| RP:PFM:NREP 2 RP:PFM:REP 41->178|PF01565|2e-19|42.2|135/139|FAD_binding_4| RP:PFM:REP 220->468|PF02913|2e-19|34.3|239/242|FAD-oxidase_C| HM:PFM:NREP 2 HM:PFM:REP 221->469|PF02913|6.5e-52|29.5|241/249|FAD-oxidase_C| HM:PFM:REP 41->180|PF01565|3.4e-39|39.0|136/138|FAD_binding_4| GO:PFM:NREP 4 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01565|IPR006094| GO:PFM GO:0050660|"GO:FAD binding"|PF01565|IPR006094| GO:PFM GO:0003824|"GO:catalytic activity"|PF02913|IPR004113| GO:PFM GO:0050660|"GO:FAD binding"|PF02913|IPR004113| RP:SCP:NREP 2 RP:SCP:REP 15->217|1i19A2|9e-39|21.3|197/217|d.145.1.1| RP:SCP:REP 221->470|1f0xA1|8e-32|15.8|222/237|d.58.32.2| HM:SCP:REP 3->219|1f0xA2|4.6e-74|50.5|214/0|d.145.1.1|1/1|FAD-binding domain| HM:SCP:REP 222->470|1e8gA1|1.4e-56|35.9|234/0|d.58.32.1|1/1|FAD-linked oxidases, C-terminal domain| OP:NHOMO 2123 OP:NHOMOORG 791 OP:PATTERN 22-1-13212222212112232131--11122----------------13111----1--12113--1 12354--1111-2-33333-332244434443333328B6144131121111143311--22524664321--------1-141111111-----------11--1-1-1---------------1122121211165533----32222221222211121222232222-1-----1----22233---21122222222223222353111122234413--------2------------------------1111----11--11------------------------------------------------------4-121111111212-122211121-1-1--2-461121--42--1--1-221311411111348563254564544444443446-34633A3755316443459535866411155544564452222222242222235-----------------------------1126115444565575734445668845444374668771333354433737439233211-23111111122234414723345453555-322112222444445232--1111111121111111111111221-1-2-1----1------1----1--1-21---4223---------1-1-1--1111111--112111111-1111111--1-----1111-1111111111-1-------------------------1--111----22444-------------1-11111112324-555543333444522222----1---1111-11111--22222222222232222112-221111----------1--------------------------11---2---321 ----332-531-2422444353455533333233333433233233334446674334344423324334223243313334444312-46442323332322433-323733243331-133284152AP5-425121-322311313231-23241569423321414335342222H2221131-63312164642 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 470 STR:RPRED 100.0 SQ:SECSTR ccHHHHHHHHHHHHcGGGEEEccccccccccccccTTcccccEEEccccHHHHHHHHHHHHHHTccEEEEcccccTTTTTTccccTTcEEEEcTTcccEEEEETTTTEEEEcTTccHHHHHHHHHHTTcTTTEEccccccTTccHHHHHHTTcccccTTccTGGGEEEEEEEETTccEEEGTTccGGGccccTTTTTGGGcccccEEEEEEEEEcEEccccEEEEEEEEccTTHHHHHHHHHHHHHTTccccccEEEEHHHHHHHHccGGGTccccccccHHHHHHHHHHHTcccEEEEEEHHHHHHHHTTcTTcEEEcGGGccTTcHHHHHHHHTTTccccGGGGccEEcccHHHHHHHHHHHHHHHHHHHHTccccEEEEEccccEEEEEEEEEETTcHHHHHHHHHHHHHHHHHHHHTTcccccccGGGHHHHHHHTcHHHHHHHHHHHHHHHHHcTTccccTTGGG DISOP:02AL 1-1| PSIPRED cccHHHHHHHHHHHccccEEccHHHHHHHHcccccccccccEEEEEcccHHHHHHHHHHHHHcccEEEEEcccccccccEEccccccEEEEEccccccEEEEEccccEEEEEccccHHHHHHHHHHcccEEEEccccccccEEcHHcccccccccccccHHHHHHEEEEEEEcccccEEEEccccccccccccHHHHHHccccccEEEEEEEEEEEEccccEEEEEEEEccHHHHHHHHHHHHHHcccccEEEEcccHHHHHHHHHHccccccccccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccHHHHHHHHHHHHHHHHHcccccEEEEEEEEccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHccEEEEEccccHHHHHHHHHcccHHHHHHHHHHHHHHcccccccccccc //