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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08677.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  97/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
d.129.3
:329 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   21->165 1xfsB PDBj 8e-10 29.9 %
:BLT:PDB   186->311 1xuvA PDBj 8e-08 31.5 %
:RPS:PDB   24->172 3cnwA PDBj 6e-15 10.9 %
:RPS:PDB   184->326 3cnwA PDBj 3e-09 11.0 %
:RPS:SCOP  24->167 1z94A1  d.129.3.5 * 4e-25 23.7 %
:RPS:SCOP  184->325 1z94A1  d.129.3.5 * 7e-17 22.4 %
:HMM:SCOP  21->170 1z94A1 d.129.3.5 * 3.5e-28 28.2 %
:HMM:SCOP  184->331 1xfsA_ d.129.3.5 * 9.4e-21 28.3 %
:RPS:PFM   33->168 PF08327 * AHSA1 6e-07 31.9 %
:RPS:PFM   192->319 PF08327 * AHSA1 1e-09 37.3 %
:HMM:PFM   32->167 PF08327 * AHSA1 6.3e-25 32.2 121/123  
:HMM:PFM   191->323 PF08327 * AHSA1 2e-24 36.1 122/123  
:REPEAT 2|25->152|184->312
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08677.1 GT:GENE ABF08677.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(1950998..1951987) GB:FROM 1950998 GB:TO 1951987 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID ABF08677.1 GB:DB_XREF GI:93354588 LENGTH 329 SQ:AASEQ MATATETSKATTKTQASAAADRESLTVSRAFNAPRDLVFQAWSAAEHLKHWFCPQGFTIPECEVEFRPGGKFDLWMRSLDGNYSHWIRGHYVEIIPHSRLVLDMTVVTEAGVALFNANTSVTFETVCGGTEMSVTQRYTALDPSAGNFTRGAEEGWAQTLDRLEKEVARIAAATPARSVAHGVFTIERTYDASPELVFRALSDPVAKAQWFNGGPGYTEVKRTMDVRPGGREHLQGRWENGLVSTFDAVYFDVIPNERLVYSYEMHMGERKISVSLATFELKRAGQGTRLVMTEQGAFLDGYDDAGSREHGSGLLLDAIGEWLKAMTKR GT:EXON 1|1-329:0| NREPEAT 1 REPEAT 2|25->152|184->312| SEG 2->20|atatetskattktqasaaa| BL:PDB:NREP 2 BL:PDB:REP 21->165|1xfsB|8e-10|29.9|137/149| BL:PDB:REP 186->311|1xuvA|8e-08|31.5|124/160| RP:PDB:NREP 2 RP:PDB:REP 24->172|3cnwA|6e-15|10.9|138/139| RP:PDB:REP 184->326|3cnwA|3e-09|11.0|133/139| RP:PFM:NREP 2 RP:PFM:REP 33->168|PF08327|6e-07|31.9|121/124|AHSA1| RP:PFM:REP 192->319|PF08327|1e-09|37.3|118/124|AHSA1| HM:PFM:NREP 2 HM:PFM:REP 32->167|PF08327|6.3e-25|32.2|121/123|AHSA1| HM:PFM:REP 191->323|PF08327|2e-24|36.1|122/123|AHSA1| GO:PFM:NREP 2 GO:PFM GO:0006950|"GO:response to stress"|PF08327|IPR013538| GO:PFM GO:0006950|"GO:response to stress"|PF08327|IPR013538| RP:SCP:NREP 2 RP:SCP:REP 24->167|1z94A1|4e-25|23.7|135/140|d.129.3.5| RP:SCP:REP 184->325|1z94A1|7e-17|22.4|135/140|d.129.3.5| HM:SCP:REP 21->170|1z94A1|3.5e-28|28.2|142/0|d.129.3.5|1/2|Bet v1-like| HM:SCP:REP 184->331|1xfsA_|9.4e-21|28.3|145/0|d.129.3.5|2/2|Bet v1-like| OP:NHOMO 148 OP:NHOMOORG 99 OP:PATTERN ----------------------------------------------1--------------------- 124-1---------------------------1-----1----------11----------11-1-2--------------------------------------1---1------------------------------------1-------------------1----------------1--------------------------1------1-------------33--------------------------------------------------------------------------------------------------------------------------------------------1--2111------21----1-----------------11111-1-332-2---43144343--1---1-------------------------------------------------------121--1-1-111111-------12------2--1111--111--1--1-2-1-----------------------2---------------------------23-----------------------------------------1111----------------------------------------------------------------111--------------------------------------------------------------------------------------------11-1-1111----------------------------------------------112233------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 308 STR:RPRED 93.6 SQ:SECSTR ####################cTTEEEEEEEEcccHHHHHHHHccTTcGGGTcTTTTEEEEccEEEEEGGGTEEEEEcTTccEEEEEEEEEEEEETTTTEEEEEEEEEccccEEEEEEEEEEEEcccTTcEEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHccccHccHcTTT#ccEEEEEEEcccHHHHHHHHccTTcGGGTcTTcTTEEEEEcEEEEEGGGTEEEEEcTTccEEEEEEEEEEEETTTTEEEEEEEccccEEEEEEEEEEEEEcccTTcEEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHccHHH DISOP:02AL 1-19,168-180,328-330| PSIPRED cccccccccccccccccccccccEEEEEEEEcccHHHHHHHHccHHHHHHHccccccEEEEEEEEEEcccEEEEEEEcccccccEEEEEEEEEEEcccEEEEEEcccccccccccccEEEEEEEEccccEEEEEEEEEccccHHHHHHHccHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEEcccHHHHHHHHccHHHHHHHcccccccEEEEEEEEEccccEEEEEEEcccccEEEEEEEEEEEEcccEEEEEEccccccccccEEEEEEEEEEccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //