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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08680.1
DDBJ      :             Uncharacterized protein UPF0065
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  182/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
a.288.1c.94.1e.26.1
:343 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   45->309 2qpqA PDBj 2e-38 33.0 %
:RPS:PDB   42->339 2dvzA PDBj 3e-51 30.6 %
:RPS:SCOP  41->100 1jqkA  e.26.1.2 * 5e-11 15.0 %
:RPS:SCOP  252->339 2o70A1  a.288.1.1 * 2e-13 9.1 %
:HMM:SCOP  125->312 1hslA_ c.94.1.1 * 3.5e-08 23.8 %
:RPS:PFM   64->336 PF03401 * Bug 1e-44 40.5 %
:HMM:PFM   64->339 PF03401 * Bug 5.1e-73 37.5 272/274  
:BLT:SWISS 46->312 YGB7_RALEU 4e-39 34.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08680.1 GT:GENE ABF08680.1 GT:PRODUCT Uncharacterized protein UPF0065 GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1953174..1954205 GB:FROM 1953174 GB:TO 1954205 GB:DIRECTION + GB:PRODUCT Uncharacterized protein UPF0065 GB:PROTEIN_ID ABF08680.1 GB:DB_XREF GI:93354591 InterPro:IPR005064 LENGTH 343 SQ:AASEQ MSLSQPLHLPALLRRLCATIGAATVVTAVTAVCTLTLPAAHAQSDKPIRILVGYPAGGTADLAARLVGDKLREELKQTVVIENKPGAGGRLVMDYAKSQAGDGNTIVLANSAVMTIAPLVYRKLNYDVARDFTPVAQVANFQLALATGPGTPAKSFKDYVAWLKTNSVDSTHAAYASPALGSIPHFFGLMIGKQVGVSMLHVPFNGSAPLMTALIGGQVPASVDTLADLTEMHRAGKIHVLATSGTRRSAALPDVPTFTELGYKDIEGVGRYGFIAPAGTSRATIDRLNAAVAHAIASPDLQQKFLKLGLEPQSGSADAFAAVLAGDATRWGPVVKASGYVGD GT:EXON 1|1-343:0| BL:SWS:NREP 1 BL:SWS:REP 46->312|YGB7_RALEU|4e-39|34.4|259/327| SEG 18->40|atigaatvvtavtavctltlpaa| SEG 314->328|sgsadafaavlagda| BL:PDB:NREP 1 BL:PDB:REP 45->309|2qpqA|2e-38|33.0|261/296| RP:PDB:NREP 1 RP:PDB:REP 42->339|2dvzA|3e-51|30.6|288/292| RP:PFM:NREP 1 RP:PFM:REP 64->336|PF03401|1e-44|40.5|269/274|Bug| HM:PFM:NREP 1 HM:PFM:REP 64->339|PF03401|5.1e-73|37.5|272/274|Bug| GO:PFM:NREP 1 GO:PFM GO:0030288|"GO:outer membrane-bounded periplasmic space"|PF03401|IPR005064| RP:SCP:NREP 2 RP:SCP:REP 41->100|1jqkA|5e-11|15.0|60/610|e.26.1.2| RP:SCP:REP 252->339|2o70A1|2e-13|9.1|88/165|a.288.1.1| HM:SCP:REP 125->312|1hslA_|3.5e-08|23.8|160/238|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 2241 OP:NHOMOORG 187 OP:PATTERN -------------------------------------------------------------------- -------------------------1-------111-1-1----1-------132---------111-111-----------------------------------------------------------------1----------------------------------------------41---11---11111111--1111114122-1111--113--------3--------------------------------------------------------------------------------------------5---------------------1----1----44-----1-------1---------------Y56--774886----------2-21111---F---14423375225462---6342-243-2--------------1------------------------------------R****-------------1---------D****8G322K7tkj*f*3**591-----------------1----12-1-1----1----------1111-------------------------------11--------1-1111----11------------------------1------1-111-------111-1--1-11-113-------1-----------------------------------------------------224-----2--------1----------2---1-----1------------------1-111111111112--1--------------1------------------------------------------------3------ -------------1------------------------------------------------------------------------------------------------------------------------------------------------L--------------1-----------1--l---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 300 STR:RPRED 87.5 SQ:SECSTR #########################################ccccccEEEEEcccTTcHHHHHHHHHHHHHHHHHHTccEEEEcccGGGHHHHHHHHHccTTccEEEEEcHHHHHHHHHcTTTccccTTTcEEEEEEEEEEcEEEEEcTTcccccHHHHHHHHHTcTTTTcTcEEEEccTTcHHHHHHHHccHHHTcccEEEEcccHHHHHHHHHHTcccEEEEEHHHHTHHHHTTccEEEEEccccccGGGTTcccTTTTTcGGGcccEEEEEEEETTcccHHHHHHHHHHHHHHTcHHHHHHHHHHTEEEccccHHHHHHHHHHHHHHHHHHHHcTTcc## DISOP:02AL 1-5,343-344| PSIPRED ccccccccccHHHHHHHHHHcHHHHHHHHHHHHEEccccccccccccEEEEEccccccHHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHcccccccEEEEEccHHHHHHHHHcccccccHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHccccccEEEEEccccccHHHHHHHHHHHHccccEEEEccccHHHHHHHHHcccccEEEEcHHHHHHHHHcccEEEEEEEcccccHHccccccHHHcccccEEEEEEEEEEEcccccHHHHHHHHHHHHHHHccHHHHHHHHHcccEEEccccHHHHHHHHccHHHHHHHHHHcccccc //