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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08687.1
DDBJ      :             2,3-dimethylmalate lyase
Swiss-Prot:             

Homologs  Archaea  44/68 : Bacteria  370/915 : Eukaryota  67/199 : Viruses  0/175   --->[See Alignment]
c.1.12c.68.1
:564 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->298 1s2tB PDBj e-113 68.2 %
:BLT:PDB   307->414 1jylA PDBj 2e-14 35.2 %
:RPS:PDB   9->290 3e5bA PDBj 8e-31 19.0 %
:RPS:PDB   307->543 3d8vA PDBj 4e-15 22.0 %
:RPS:SCOP  15->298 1m1bA  c.1.12.7 * 2e-33 68.7 %
:RPS:SCOP  307->418 1jykA  c.68.1.13 * 2e-27 33.9 %
:HMM:SCOP  11->299 1pymA_ c.1.12.7 * 5.9e-86 35.3 %
:HMM:SCOP  302->543 1jykA_ c.68.1.13 * 8.7e-33 32.3 %
:RPS:PFM   86->168 PF00463 * ICL 1e-06 37.0 %
:RPS:PFM   307->365 PF00483 * NTP_transferase 3e-10 45.8 %
:HMM:PFM   307->362 PF00483 * NTP_transferase 2.2e-07 37.5 56/248  
:HMM:PFM   86->123 PF00463 * ICL 2.2e-06 42.1 38/526  
:BLT:SWISS 13->298 PEPM_MYTED e-113 68.2 %
:BLT:SWISS 298->415 GLMU_DEIRA 8e-13 38.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08687.1 GT:GENE ABF08687.1 GT:PRODUCT 2,3-dimethylmalate lyase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1959433..1961127 GB:FROM 1959433 GB:TO 1961127 GB:DIRECTION + GB:PRODUCT 2,3-dimethylmalate lyase GB:PROTEIN_ID ABF08687.1 GB:DB_XREF GI:93354598 InterPro:IPR000918 InterPro:IPR012698 LENGTH 564 SQ:AASEQ MNAHDPNLLATSRSARLRQMLRSNELEFIMEAHNGLSARIVREAGFKGIWASGLAISAQFGVRDNNEASWTQVVDNLEFMADASDLPILLDGDTGYGNFNNVRRLVRKLEQRGIAGVCIEDKIFPKTNSFIGGEQQPLADIDEFCGKIKAGKDSQADDDFSIVARVEALIAGWGMEEALRRAEAYRQAGADAILIHSKLSKADEIVTFAREWAGRAPLVIVPTKYYSTPTDVFRKAGISLVIWANHLIRVAASSMQAVAREIHDSQTLVNVEDRIATVNEIFRLQDADEYSAAEKIYLTGGQAPSSAVVLAAGRGKGLEALTEDKPKIMLPVAGKPLLRWLVDGFKNQGINDITVVGGYKAEAIDAAGIKLVRNERHAATGELASLACAADSLETDTVVSYGDLMFRSYILRDLLETDAPFSVVVDSSESAPSNQSVRDFAWCSAADDRDLFGQKVLLRKISDTPAATDGEPHGRWIGLLNVRGEGRARLQKLLAELRQRPDFDSLDMPDLINALVEAGEKVEVRYVHGHWRGVNDLEDFRRAGDFAHTQTPYALGNNDGETAR GT:EXON 1|1-564:0| BL:SWS:NREP 2 BL:SWS:REP 13->298|PEPM_MYTED|e-113|68.2|286/295| BL:SWS:REP 298->415|GLMU_DEIRA|8e-13|38.3|115/484| BL:PDB:NREP 2 BL:PDB:REP 13->298|1s2tB|e-113|68.2|286/291| BL:PDB:REP 307->414|1jylA|2e-14|35.2|108/228| RP:PDB:NREP 2 RP:PDB:REP 9->290|3e5bA|8e-31|19.0|273/397| RP:PDB:REP 307->543|3d8vA|4e-15|22.0|218/478| RP:PFM:NREP 2 RP:PFM:REP 86->168|PF00463|1e-06|37.0|81/176|ICL| RP:PFM:REP 307->365|PF00483|3e-10|45.8|59/238|NTP_transferase| HM:PFM:NREP 2 HM:PFM:REP 307->362|PF00483|2.2e-07|37.5|56/248|NTP_transferase| HM:PFM:REP 86->123|PF00463|2.2e-06|42.1|38/526|ICL| GO:PFM:NREP 4 GO:PFM GO:0003824|"GO:catalytic activity"|PF00463|IPR000918| GO:PFM GO:0008152|"GO:metabolic process"|PF00463|IPR000918| GO:PFM GO:0009058|"GO:biosynthetic process"|PF00483|IPR005835| GO:PFM GO:0016779|"GO:nucleotidyltransferase activity"|PF00483|IPR005835| RP:SCP:NREP 2 RP:SCP:REP 15->298|1m1bA|2e-33|68.7|284/291|c.1.12.7| RP:SCP:REP 307->418|1jykA|2e-27|33.9|112/229|c.68.1.13| HM:SCP:REP 11->299|1pymA_|5.9e-86|35.3|289/0|c.1.12.7|1/1|Phosphoenolpyruvate/pyruvate domain| HM:SCP:REP 302->543|1jykA_|8.7e-33|32.3|220/0|c.68.1.13|1/1|Nucleotide-diphospho-sugar transferases| OP:NHOMO 710 OP:NHOMOORG 481 OP:PATTERN 11---11111111112-221121-11111113111----1-112-232----------11-221--13 -----1-1222---112-------14-----------1-11221111--111211111--1-1-------------------1-----211--------------------------------------------------221-2---1----------1-1----11-1-------1------1-----2-1111111121121112111111111---11--11111--1--------------------------------------------------------11111112111---------------------------1-------1-----------2---------------11-----1-----2111-------123--123112----------1---1--2--121-1--3--------1-11-211----1-1111111111-----21-----------------------------1--31-464142223222232222433333-23271313--222--1211-1-2211---1-111111111112-1-11-----------1----11-212-----3--1--1-1-1211-2--------1-----21-11-111111222221111121121111---212-------1---1--1111111111-11-111111111111-111---1112-1111111111111111------------------------11111111111-1122---------------11111111112-22223342232232222-----------1-1111111111112111111111111---1--11----------1---------------------------------1------ -----1--------1211133324445---------1111111---21122354-----111------------1--------------231111-------1----121------------------------------------------------------1--------1-122-G121-112321611221221 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 549 STR:RPRED 97.3 SQ:SECSTR ###cTHHHHHHHHHHHHHHHHHHcccEEEEccccHHHHHHHHHTTcccEEEcHHccTTcccccccccccTTHHHHHHHHHHHHccccEEEEcTTccccHHHHHHHHHHHHHHTccEEEEEcccccccETcccccccEEccHHHHHHHHHHHHHHHHTcccEEEEEEcTTTccEEcccccTTTGGGccTTccccTTccEEccccHHHHHHHHHHHHHHcTTccEEEEcccHHHHHHTTEEEEEETTHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTccTTcHHHHHHHHHHHHHEHHHEEEEcccccGGGccccccccGGGcEETTEEHHHHHHHHHHTTcccEEEEEEcTTGGGTHHHTcccEEEEccccccHHHHHHHHHTTcccEEEEEETTcTccHHHHHHHHHHTccEEEEEEEccccTTccEEEccEEEEcTTccccEcTTccEEEEEcGGGccTTGGGccEEEEEEEETTHHHHHHHHHHTcccccccccccTTHHHHHHHHTTccEEEEEcccGGGGcccccHHHHHHHHcTTccE############ DISOP:02AL 1-17,556-565| PSIPRED ccccccccccccHHHHHHHHHHccccEEEcccccHHHHHHHHHccccEEEEcHHHHHHHHcccccccccHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHccccEEEEEccccccccccccccccEEEcHHHHHHHHHHHHHHcccccEEEEEEEcHHHHcccHHHHHHHHHHHHHccccEEEcccccccHHHHHHHHHHccccccEEEEccccccccHHHHHHccccEEEEcHHHHHHHHHHHHHHHHHHHHccccccHHHHHccHHHHHHHHcHHHHHHHHHHHHHccccccEEEEEEcccccccccccccccccEEEEccEEHHHHHHHHHHHccccEEEEEEccHHHHHHHcccEEEEEEcccccccHHHHHHHHHHccccEEEEEccEEccHHHHHHHHHcccccEEEEEEEccccccEEEEccccccccccccccccccEEEEEccccccccccccEEEEEEEEEcHHHHHHHHHHHHHcccccccccccHHHHHHHHHHccccEEEEEEccEEEEcccHHHHHHHHHHHHHHcccccccccccccc //