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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08732.1
DDBJ      :             Thiolase
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  626/915 : Eukaryota  192/199 : Viruses  0/175   --->[See Alignment]
c.95.1
:392 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   3->390 1ulqC PDBj 2e-71 43.5 %
:RPS:PDB   5->392 1dluA PDBj 1e-63 40.4 %
:RPS:SCOP  3->252 1afwA1  c.95.1.1 * 2e-59 36.2 %
:RPS:SCOP  268->392 1tvzA2  c.95.1.2 * 2e-24 12.0 %
:HMM:SCOP  3->268 1qflA1 c.95.1.1 * 7e-65 39.8 %
:HMM:SCOP  270->392 1ulqA2 c.95.1.1 * 4.7e-43 52.8 %
:RPS:PFM   3->252 PF00108 * Thiolase_N 2e-39 46.4 %
:RPS:PFM   269->390 PF02803 * Thiolase_C 4e-24 54.1 %
:HMM:PFM   1->261 PF00108 * Thiolase_N 1.7e-68 44.0 250/264  
:HMM:PFM   270->390 PF02803 * Thiolase_C 8e-48 51.2 121/123  
:BLT:SWISS 1->391 FADA_BACSU 2e-86 46.1 %
:PROS 86->104|PS00098|THIOLASE_1
:PROS 237->246|PS00178|AA_TRNA_LIGASE_I
:PROS 338->354|PS00737|THIOLASE_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08732.1 GT:GENE ABF08732.1 GT:PRODUCT Thiolase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(2007441..2008619) GB:FROM 2007441 GB:TO 2008619 GB:DIRECTION - GB:PRODUCT Thiolase GB:PROTEIN_ID ABF08732.1 GB:DB_XREF GI:93354643 InterPro:IPR001412 InterPro:IPR002155 LENGTH 392 SQ:AASEQ MNEAVIVSTARTGLAKSWKGAFNMTHGATLGGHAVQHAIARAKIEAGEVEDVLMGCANPEGATGANIARQIALRAGCPVTVPGATVNRFCSSGLQTIAMAAQRVIADEGDIFVAGGVESISCVQQDMNRHMIQESWLNKNKPEIYWSMLQTAENVAKRYNIGKDRQDEYGVQSQLRAAAALEAGKFKDEIVPMTVLAGVADKATGQLMTKEVTIDADEGIRADTTLEAVSKIRTAMPGGVITAGNASQFSDGASAAVVMNARVAAAKGLQPLGVFRGFAVAGCEPDEMGIGPVFAVPKLLKKAGLKVDDIGLWELNEAFAVQVLYCADKLGIPMDRLNVNGGAIAVGHPYGVSGARLVGHALIEGKRRGVKYVVVTMCIGGGQGAAGLFEVL GT:EXON 1|1-392:0| BL:SWS:NREP 1 BL:SWS:REP 1->391|FADA_BACSU|2e-86|46.1|388/391| PROS 86->104|PS00098|THIOLASE_1|PDOC00092| PROS 237->246|PS00178|AA_TRNA_LIGASE_I|PDOC00161| PROS 338->354|PS00737|THIOLASE_2|PDOC00092| SEG 253->266|asaavvmnarvaaa| BL:PDB:NREP 1 BL:PDB:REP 3->390|1ulqC|2e-71|43.5|377/399| RP:PDB:NREP 1 RP:PDB:REP 5->392|1dluA|1e-63|40.4|376/389| RP:PFM:NREP 2 RP:PFM:REP 3->252|PF00108|2e-39|46.4|237/261|Thiolase_N| RP:PFM:REP 269->390|PF02803|4e-24|54.1|122/131|Thiolase_C| HM:PFM:NREP 2 HM:PFM:REP 1->261|PF00108|1.7e-68|44.0|250/264|Thiolase_N| HM:PFM:REP 270->390|PF02803|8e-48|51.2|121/123|Thiolase_C| GO:PFM:NREP 4 GO:PFM GO:0008152|"GO:metabolic process"|PF00108|IPR002155| GO:PFM GO:0016747|"GO:transferase activity, transferring acyl groups other than amino-acyl groups"|PF00108|IPR002155| GO:PFM GO:0008152|"GO:metabolic process"|PF02803|IPR002155| GO:PFM GO:0016747|"GO:transferase activity, transferring acyl groups other than amino-acyl groups"|PF02803|IPR002155| RP:SCP:NREP 2 RP:SCP:REP 3->252|1afwA1|2e-59|36.2|235/266|c.95.1.1| RP:SCP:REP 268->392|1tvzA2|2e-24|12.0|125/221|c.95.1.2| HM:SCP:REP 3->268|1qflA1|7e-65|39.8|251/0|c.95.1.1|1/1|Thiolase-like| HM:SCP:REP 270->392|1ulqA2|4.7e-43|52.8|123/0|c.95.1.1|1/1|Thiolase-like| OP:NHOMO 3739 OP:NHOMOORG 848 OP:PATTERN 11-1--1222222221-12222133111--13-----------------------------2221--- 233473-41123339GE66-6C33BC666669DDDDCORU294F23342111777346--89A-7699987-----------7----------------3-333232232--------------------------33344---311-12--1-----------1------------------75544---533444444443445444352233444464463111111172-333333333333333222311111111111--11111--1-1221---3111--------------3333333333333-11---1112-13221111111111-3332111-1-1-5-12-872516-151--1-11-5--C888-----32A782337986634444444435-22522824438-444354555655583635575555467--------511-1546------------1111-21--1--1----159F8-4A95A888AA867888889A888878I9FBEF921896966AAA98CC7225----44-------221B764C46-----------524-7-2--44445513-----------1-1111111-------33-462534633333334733334353354---3411------43421345334544555-355444454434444544678733332333333333333333373323334--222222222222---3222223333-7537-------11-11-1-999896A56481AA9A7A79A97996666111111111-222433333553443344444445------2222233311111111--1-------------------------11111-1------ 11--334-42--5655566766666675667664445565455676555557786755565532422214223242212224444411-56454443433545A561554A8B54885455655AE4G3Dn5-A695553445545535564485695B35648545446745642261J1114244976854475644 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 392 STR:RPRED 100.0 SQ:SECSTR TTTEEEEEEEEcccEETTTcTTTTccHHHHHHHHHHHHHHHHTccGGGccEEEEEccccTTcccHcHHHHHHHHTTccTTcEEEEEccGGGHHHHHHHHHHHHHHTTcccEEEEEEEEEcTTccEEccccEEHHHHHHTccTTTcccHHHHHHHHHHHHTccHHHHHHHHHHHHHHHHHHHHTTTTTTTcccEEEEEEcTTTccEccccccEEEcccTTccTTccHHHHHTcccccTTcccccccccccEEEEEEEEEEEHHHHHHHTccccEEEEEEEEEEccGGGGGGTHHHHHHHHHHHHTccGGGccEEEEccccHHHHHHHHHHHcccGGGccTTccHHHHcccTTTHHHHHHHHHHHHHHHHTccEEEEEEEETTTEEEEEEEEcc PSIPRED ccccEEEEEEEcccEEccccccccccHHHHHHHHHHHHHHHccccHHHccEEEEEEEEcccccccHHHHHHHHHccccccccEEEEEcHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccHHccEEEEEEEcccccccccccccccEEEEccccccccccHHHHHccccccccccccHHHcccccccccHHHHHHHHHHHHccccEEEEEEEEEEEEccHHHccccHHHHHHHHHHHccccHHHccEEEEccccHHHHHHHHHHccccHHHccccccHHHccccccHHHHHHHHHHHHHHHHccccEEEEEEEcccccEEEEEEEEc //