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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08785.1
DDBJ      :             Uncharacterized protein UPF0065
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  208/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
a.288.1c.94.1e.26.1
:325 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   29->321 2qpqA PDBj 1e-58 37.9 %
:RPS:PDB   28->323 2dvzA PDBj 2e-68 36.0 %
:RPS:SCOP  10->70 1jqkA  e.26.1.2 * 3e-07 11.7 %
:RPS:SCOP  233->325 2o70A1  a.288.1.1 * 4e-23 7.5 %
:HMM:SCOP  114->287 1hslA_ c.94.1.1 * 2.2e-15 31.5 %
:RPS:PFM   48->319 PF03401 * Bug 1e-64 51.1 %
:HMM:PFM   49->320 PF03401 * Bug 3.5e-100 46.7 272/274  
:BLT:SWISS 3->325 YTCB_PSESQ 7e-62 38.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08785.1 GT:GENE ABF08785.1 GT:PRODUCT Uncharacterized protein UPF0065 GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(2075741..2076718) GB:FROM 2075741 GB:TO 2076718 GB:DIRECTION - GB:PRODUCT Uncharacterized protein UPF0065 GB:PROTEIN_ID ABF08785.1 GB:DB_XREF GI:93354696 InterPro:IPR005064 LENGTH 325 SQ:AASEQ MLRRFKALGAMLSLVMASTMATAAPPHYPSKPIRLVVPFSAGSATDILARIISTKMGEGGTYQIVVDNRPGAGGTLGATTVARSAPDGYTLILVSVGHAINATLYPKLGYDTVKDFAPVSLVASVPNVLVVNAASPYKSVRDLVTAAKAKPGAMNFDSAGSGSSTHLSGELFKMQAGIDIVHIPYKGTGEALTDVMAGRGDMMFAPTLSAMPFVKQGKLRALAVTTPARTSVLPDIPTVAEAGLPSYAFDSWFGVLAPAGTPKEIVDALNAEIGKVLASPDVRERMAAQGAEPRRSTPQAFASYIQVEIGKLAPVVRQSGVTAGQ GT:EXON 1|1-325:0| BL:SWS:NREP 1 BL:SWS:REP 3->325|YTCB_PSESQ|7e-62|38.2|322/336| SEG 71->82|gaggtlgattva| BL:PDB:NREP 1 BL:PDB:REP 29->321|2qpqA|1e-58|37.9|293/296| RP:PDB:NREP 1 RP:PDB:REP 28->323|2dvzA|2e-68|36.0|289/292| RP:PFM:NREP 1 RP:PFM:REP 48->319|PF03401|1e-64|51.1|272/274|Bug| HM:PFM:NREP 1 HM:PFM:REP 49->320|PF03401|3.5e-100|46.7|272/274|Bug| GO:PFM:NREP 1 GO:PFM GO:0030288|"GO:outer membrane-bounded periplasmic space"|PF03401|IPR005064| RP:SCP:NREP 2 RP:SCP:REP 10->70|1jqkA|3e-07|11.7|60/610|e.26.1.2| RP:SCP:REP 233->325|2o70A1|4e-23|7.5|93/165|a.288.1.1| HM:SCP:REP 114->287|1hslA_|2.2e-15|31.5|149/238|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 2318 OP:NHOMOORG 213 OP:PATTERN -------------------------------------------------------------------- --------111----------1---1-------222-1-1----1-------132-1-------212-111-----------1-----------------------------------------------------111--------------------------------------------41---11---1---------1111--5122-1-11--113--------3--------------------------------------------------------------------------------------------5---------------------1----1----55-----1-------1---------------Z67--874986----------3-21111---F---14423376336562---6353-354-3--------------1------------------------------1-----R****-------------1---------D****8G322K7tkj*e*3**5A1-----------------1----12-1-1----1----------1111-------------------------------11--------1-1111----11---------------------1111------1-111-------111-1--1-11-113------11111-1111111-1--11------------------------------------276---1-2--------1--------1-4-----11--11111-111----------1-111111111112--1--------------1------------------------------------------------4------ -------------1------------------------------------------------------------------------------------------------------------------------------------------------M--------------1-----------1--t---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 323 STR:RPRED 99.4 SQ:SECSTR cEEEccTTccHHHHHccTTccEEEEcHcccccEEEEEcccTTcHHHHHHHHHHHHHHHHTccccEEEEcccGGGHHHHHHHHHccTTccEEEEEcHHHHHHHHcTTTccccTTTcEEEEEEEEEEcEEEEEcTTcccccHHHHHHHHHTcTTTcEEEEccTTcHHHHHHHHHHccHTcccEEEEcccHHHHHHHHHHTcccEEEEEEHHHHHHHHTTccETEEEEcccccGGGTTcccTTTTTcGGGcccEEEEEEEETTccHHHHHHHHHHHHHHHTcHHHHHHHHHHTEEEccccHHHHHHHHHHHHHHHHHHHHcTTccc## DISOP:02AL 1-2,323-326| PSIPRED cHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEccccccHHHHHHHHHHHHHHHHccccEEEEcccccccccHHHHHHcccccccEEEEEccHHHHHHHHcccccccHHHHHHHHHHHHcccEEEEEccccccccHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHcccccEEEEcHHHHHHHHHcccEEEEEEEcccccccccccccHHHcccccEEEEEEEEEEEcccccHHHHHHHHHHHHHHHccHHHHHHHHHcccEEccccHHHHHHHHHHHHHHHHHHHHHHcccccc //