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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08794.1
DDBJ      :             two component transcriptional regulator, LuxR family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  292/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:135 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->127 1yioA PDBj 3e-32 50.4 %
:RPS:PDB   4->116 3cwoX PDBj 1e-16 17.7 %
:RPS:SCOP  1->52 1p2fA2  c.23.1.1 * 4e-09 28.8 %
:RPS:SCOP  69->130 1a04A1  a.4.6.2 * 6e-14 35.5 %
:HMM:SCOP  4->68 1w25A1 c.23.1.1 * 3e-11 32.3 %
:HMM:SCOP  49->135 1p4wA_ a.4.6.2 * 1.5e-17 41.4 %
:RPS:PFM   5->44 PF00072 * Response_reg 7e-07 47.5 %
:RPS:PFM   70->125 PF00196 * GerE 4e-10 51.8 %
:HMM:PFM   69->125 PF00196 * GerE 8.6e-21 49.1 57/58  
:HMM:PFM   4->44 PF00072 * Response_reg 5.4e-11 43.9 41/112  
:BLT:SWISS 1->130 NODW_BRAJA 4e-42 59.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08794.1 GT:GENE ABF08794.1 GT:PRODUCT two component transcriptional regulator, LuxR family GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(2083961..2084368) GB:FROM 2083961 GB:TO 2084368 GB:DIRECTION - GB:PRODUCT two component transcriptional regulator, LuxR family GB:PROTEIN_ID ABF08794.1 GB:DB_XREF GI:93354705 InterPro:IPR000792 InterPro:IPR001789 LENGTH 135 SQ:AASEQ MGIHIPIIFMTGYGDIAMSVAAMKAGAEDFMAKPFRDQDLLDAVSAALEKDRLRRQAVGKVDEIRANYATLTPRESEVMGLAVTGLLNKQIAGEIGISEVTVKIHRGQAMRKMRARTFADLVLLAQQLGICRADR GT:EXON 1|1-135:0| BL:SWS:NREP 1 BL:SWS:REP 1->130|NODW_BRAJA|4e-42|59.2|130/227| BL:PDB:NREP 1 BL:PDB:REP 5->127|1yioA|3e-32|50.4|123/198| RP:PDB:NREP 1 RP:PDB:REP 4->116|3cwoX|1e-16|17.7|113/236| RP:PFM:NREP 2 RP:PFM:REP 5->44|PF00072|7e-07|47.5|40/111|Response_reg| RP:PFM:REP 70->125|PF00196|4e-10|51.8|56/57|GerE| HM:PFM:NREP 2 HM:PFM:REP 69->125|PF00196|8.6e-21|49.1|57/58|GerE| HM:PFM:REP 4->44|PF00072|5.4e-11|43.9|41/112|Response_reg| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0003700|"GO:transcription factor activity"|PF00196|IPR000792| GO:PFM GO:0005622|"GO:intracellular"|PF00196|IPR000792| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00196|IPR000792| GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF00196|IPR000792| RP:SCP:NREP 2 RP:SCP:REP 1->52|1p2fA2|4e-09|28.8|52/120|c.23.1.1| RP:SCP:REP 69->130|1a04A1|6e-14|35.5|62/67|a.4.6.2| HM:SCP:REP 4->68|1w25A1|3e-11|32.3|65/0|c.23.1.1|1/1|CheY-like| HM:SCP:REP 49->135|1p4wA_|1.5e-17|41.4|87/0|a.4.6.2|1/1|C-terminal effector domain of the bipartite response regulators| OP:NHOMO 701 OP:NHOMOORG 293 OP:PATTERN -------------------------------------------------------------------- 172-6-11--1---------------------1---4443---3111--1-111--1-----3-2--453------------1-----11---------------1-------------------------------11-21111-1--111-22--------2121111---------------111--1--1-----------------------1------------------------------------------------------------------------------------------------------------------------------------------------1----------2-23112------2B352235345322222222221-24224237244-24427535835474-1-1-111111-1--------111--311------------------------------2352-12114534543222224463222212232221512222542234335521241-1-25----------547-------1-1-------------1-----1-2---------------------------1--12-1121-44444-2455446433452---54-1------------------------------------------1----111211111111111111112---------3------------------------1-511------1-----111-------1--2122222262353642222-----------112-----321122232522222------1-------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 132 STR:RPRED 97.8 SQ:SECSTR HcTcccEEEEccccTHHHHHHHHHTTccEEEEcHHHHHcTHHHHHHHHHHTGGGEEccccEEEEETTTTEEEEEEHHHHHHHHHHHTccEEEEEETTTTTccccccHHHHHHHGGGcccHHHHHHHHHTTTc### DISOP:02AL 58-71,134-136| PSIPRED cccccEEEEEEccccHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHccccccHHHHHHHHHHcccccccHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccccc //