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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08803.1
DDBJ      :             short-chain dehydrogenase/reductase SDR
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  880/915 : Eukaryota  192/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:238 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->223 1q7bA PDBj 5e-29 35.3 %
:RPS:PDB   7->221 1a9zA PDBj 2e-36 12.1 %
:RPS:SCOP  6->223 1pwxA  c.2.1.2 * 4e-39 18.3 %
:HMM:SCOP  1->232 1zemA1 c.2.1.2 * 1.7e-67 42.2 %
:RPS:PFM   5->157 PF00106 * adh_short 3e-13 41.2 %
:HMM:PFM   6->158 PF00106 * adh_short 2.1e-27 30.2 149/167  
:BLT:SWISS 3->223 FABG_VIBHA 4e-30 36.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08803.1 GT:GENE ABF08803.1 GT:PRODUCT short-chain dehydrogenase/reductase SDR GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 2091301..2092017 GB:FROM 2091301 GB:TO 2092017 GB:DIRECTION + GB:PRODUCT short-chain dehydrogenase/reductase SDR GB:PROTEIN_ID ABF08803.1 GB:DB_XREF GI:93354714 InterPro:IPR001509 InterPro:IPR002198 InterPro:IPR002347 LENGTH 238 SQ:AASEQ MAERRTALVTGATKGIGLALSKHLQQLGWSVIGVARHAIEGFPGQLLTADLADIQQTDAVLAQVVAASRIDAVINNAGIALPQKLESLDLPSLQTVFDLNVRAAVQVTQACLPSLKQSPAGRIVNVCSRAIHGARDRTSYAAAKSALIGVTRTWALELAPLGITANAVAPGPVETELFRLTHPVGSDEEKRILATIPMQRLGKPEEVASLISYLISDGASFVTGQVIGIDGGGSLGGR GT:EXON 1|1-238:0| BL:SWS:NREP 1 BL:SWS:REP 3->223|FABG_VIBHA|4e-30|36.7|218/244| SEG 224->237|gqvigidgggslgg| BL:PDB:NREP 1 BL:PDB:REP 3->223|1q7bA|5e-29|35.3|218/243| RP:PDB:NREP 1 RP:PDB:REP 7->221|1a9zA|2e-36|12.1|214/338| RP:PFM:NREP 1 RP:PFM:REP 5->157|PF00106|3e-13|41.2|153/169|adh_short| HM:PFM:NREP 1 HM:PFM:REP 6->158|PF00106|2.1e-27|30.2|149/167|adh_short| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 6->223|1pwxA|4e-39|18.3|218/252|c.2.1.2| HM:SCP:REP 1->232|1zemA1|1.7e-67|42.2|232/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 15708 OP:NHOMOORG 1128 OP:PATTERN 2211235887968765192533219448697812---------11153--622-33113133753114 IKY4t41877EA94a*oJI-Jy33d*JIJJJV****h***6oC*ULFA5HF3SLOC5C11MMY6MJcehTE11113122297S11433768627221--A7Y6DF*Da9I1111111111111144526B322673GGGKN222HCJEGI9876433442653563AJEa8134222231334EB79A661F9PHHIHIKHKGIIIIKHOHPPHPHIIBHIMMKC878896Kd855555435555554CAA9C92B1AC16121AC559A7897A9876656575744444444444444566676666667644422244475358C4444343546868825756331179322A6123224333356532G2GoGGQ22222PF*mh68DbSVVPJKLJIIKILKX-JPPLHlISZvZ2*ppOpfm***usXaGNFRNbQHNQIHQAAAAAAAAPRSC8CDA11111111111222331221222121111AHq*J9KkbQe*x****XTTUQll*yXWWWAU*d*W*xe58SUPHBJHIULeKsi9GB4C8EB6122111135ALG88M68512212422326774C4394BDECRS34133222211322322222223132477AB9BBGF9LC69C9AC8FEBAA7D7CB97D1-24448111111DFIL7N9DGGDDCCCDD-GDEEECCCDDGCFCCDDCDOWPI99BBB89AABBABBA9A9ABVABAAA8C219AAAAAA9A9AA111835323BEBD5FLPJ222526211113242NOOSPCL8E9MBSURQOVaiONNUPITPP7664465463588F87887EE8ABMPOKNJHCDF75651254FF7699--------1-4----2---2-1------31------34422565753D3 11--LDH-833-5AEajWQaUYXjfkaHHAECEHJGESKQFLNCDDPReicj**PUPHILHJB6B7764953779342354779CB3C-RlHjCeE8A88D5DKLH-EQB*TYLPJE63447H5LH4H6P*G-GHI65A4I78IB3C547F51I8BEGYbaR6YMMGDCFOESSJ5BB4o1419JHPMhRaCDAcOSND ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 223 STR:RPRED 93.7 SQ:SECSTR HHHcEEEEEETTTcHHHHHHHHHHHHTTcEEEEEEccHHHTcccEEEEccTTcHHHHHHHHHHTTccEEEEccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHTccEEEEEEEGGGGcccccccccTccccccccHHHHHHHHHHHHHHHHHHHcTTcEEEEEEEcEEEcccTTccccccHcccccccHHHHHHHHHTTccccEEEEcccccccccccEc############### DISOP:02AL 1-1,235-239| PSIPRED cccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHccccEEEEEcccccHHHHHHHHHHHHHHccccEEEEcccccccccHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHcccHHHHHHHHHcccccccccHHHHHHHHHHHHcHHHcccccEEEEEccccccccc //