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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08821.1
DDBJ      :             acriflavin resistance protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  649/915 : Eukaryota  7/199 : Viruses  0/175   --->[See Alignment]
c.55.1d.225.1d.58.44f.35.1
:1036 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   52->1018 2v50A PDBj 7e-40 22.9 %
:RPS:PDB   8->335,513->968 2dhhA PDBj 1e-81 22.1 %
:RPS:SCOP  68->205 1mwkA2  c.55.1.1 * 8e-22 12.5 %
:RPS:SCOP  190->272 1iwgA5  d.225.1.1 * 1e-08 15.7 %
:RPS:SCOP  281->473 1iwgA8  f.35.1.1 * 3e-21 14.9 %
:RPS:SCOP  568->674 1iwgA3  d.58.44.1 * 6e-12 17.3 %
:RPS:SCOP  756->856 1iwgA4  d.58.44.1 * 4e-19 9.5 %
:RPS:SCOP  877->1023 1iwgA7  f.35.1.1 * 3e-15 14.4 %
:HMM:SCOP  45->142 1iwgA1 d.58.44.1 * 6.8e-20 29.5 %
:HMM:SCOP  141->331 1iwgA2 d.58.44.1 * 1.7e-20 34.6 %
:HMM:SCOP  297->506 1iwgA7 f.35.1.1 * 5e-34 30.7 %
:HMM:SCOP  566->675 1iwgA3 d.58.44.1 * 0.00044 23.8 %
:HMM:SCOP  719->806 1iwgA6 d.225.1.1 * 2.6e-18 37.5 %
:HMM:SCOP  801->1028 1iwgA8 f.35.1.1 * 2.4e-45 35.0 %
:RPS:PFM   8->1018 PF00873 * ACR_tran e-123 31.5 %
:HMM:PFM   10->1019 PF00873 * ACR_tran 4e-169 27.9 987/1021  
:BLT:SWISS 8->1017 NOLG_RHIME 1e-55 23.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08821.1 GT:GENE ABF08821.1 GT:PRODUCT acriflavin resistance protein GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(2109892..2113002) GB:FROM 2109892 GB:TO 2113002 GB:DIRECTION - GB:PRODUCT acriflavin resistance protein GB:PROTEIN_ID ABF08821.1 GB:DB_XREF GI:93354732 InterPro:IPR001036 LENGTH 1036 SQ:AASEQ MDHSRFNLSRWALEHQPLTRYLLVVLLLGGLLAFFQLGQDEDPPFTFRVMVVQALWPGATAEQIAVQVTDKIERQLQEVPYADKIRSFSKPGETTVIFQLADNAPAKDTAQIWYTVRKKIGDIQPTLPQGVRGPFFNDEFGDVYGSIYALSADGFTYKELREYADLVRQEMLRIPAVAKVSLLGLQDEKLYVEFNQARFAQLGLDINAIANQIAEQNNPTGSGVLVTPTDNLQIRITGQLGGVEDLKNLVLRGPNGIANIRLGDIAHVYRGYVDPPVSRMRFNGKDVIGLGISMEKGGDIIALGKELRRVVDGLRNQLPVGIEMDQVQDQPQAVKHSVGEFVRVLIEAVVIVLGVSFVSLGLHTRPLRLDVRPGLVVALTIPLVLAVTFLFMNIFGIGLHKISLGALIIALGLLVDDAIIAVEMMVRKLEEGFSKMEAATFAYTSTAMPMLTGTLITAAGFLPVGLARSTVGEYTFAIFAVTALALVLSWLAAVYFTPYLGYLLLKTRPSDGGHHEVFDTPFYARFRALVNWCVTWRKTVIVVTLAAFALGLFAFKFVEKQFFPDSSRPELMVELWMPEGTSFVQTEAEAKRFEVAMRRDKAVGSLTTFIGTGAPRFYLPLDQILPQSNVAQLIVMPADAEQRDVLRKRIEQVLAAEFPQLRGRVKLLPNGPPVAYPVQFRVIGPDAAGVRKAADQVRAIMAANPNTVGVNDNWNENVKMLRLELDQDKARALGVTTNAIARATQAVLTGVPVGQYRDADKLIDIVMRTPKSERDTMSDLNNILVPTSTGRAVPLTQVARVTLKSEPGVLWRENRDFGVTVQSDIVDGIQGPTVTAQIDPKLDAIRASLPPGYRITIAGAQEESGKAGASIAAQLPLCIFLIFTLLMLQLHSFSRSVMVFLTGPLGLIGAAATLLLLHAPMGFVAQLGITALLGMIIRNSVILVDQIEQDIKAGIPPWQAIVESAVRRARPIMLTAAAAVLAMIPLSRSTFWGPMAAAIMGGLIVATVLTLLFLPALYAAWFRVRAPEGGQGVMTN GT:EXON 1|1-1036:0| BL:SWS:NREP 1 BL:SWS:REP 8->1017|NOLG_RHIME|1e-55|23.4|973/1065| TM:NTM 12 TM:REGION 16->37| TM:REGION 340->362| TM:REGION 375->397| TM:REGION 405->426| TM:REGION 448->470| TM:REGION 480->502| TM:REGION 529->551| TM:REGION 868->890| TM:REGION 897->919| TM:REGION 928->950| TM:REGION 970->992| TM:REGION 998->1020| SEG 22->32|llvvlllggll| SEG 206->218|inaianqiaeqnn| SEG 404->421|lgaliialgllvddaiia| SEG 480->494|avtalalvlswlaav| SEG 545->557|laafalglfafkf| SEG 901->917|ltgplgligaaatllll| BL:PDB:NREP 1 BL:PDB:REP 52->1018|2v50A|7e-40|22.9|935/1005| RP:PDB:NREP 1 RP:PDB:REP 8->335,513->968|2dhhA|1e-81|22.1|766/1022| RP:PFM:NREP 1 RP:PFM:REP 8->1018|PF00873|e-123|31.5|987/1014|ACR_tran| HM:PFM:NREP 1 HM:PFM:REP 10->1019|PF00873|4e-169|27.9|987/1021|ACR_tran| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00873|IPR001036| GO:PFM GO:0006810|"GO:transport"|PF00873|IPR001036| GO:PFM GO:0016020|"GO:membrane"|PF00873|IPR001036| RP:SCP:NREP 6 RP:SCP:REP 68->205|1mwkA2|8e-22|12.5|128/163|c.55.1.1| RP:SCP:REP 190->272|1iwgA5|1e-08|15.7|83/92|d.225.1.1| RP:SCP:REP 281->473|1iwgA8|3e-21|14.9|181/222|f.35.1.1| RP:SCP:REP 568->674|1iwgA3|6e-12|17.3|98/107|d.58.44.1| RP:SCP:REP 756->856|1iwgA4|4e-19|9.5|95/97|d.58.44.1| RP:SCP:REP 877->1023|1iwgA7|3e-15|14.4|147/199|f.35.1.1| HM:SCP:REP 45->142|1iwgA1|6.8e-20|29.5|95/0|d.58.44.1|1/1|Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains| HM:SCP:REP 141->331|1iwgA2|1.7e-20|34.6|104/0|d.58.44.1|2/3|Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains| HM:SCP:REP 297->506|1iwgA7|5e-34|30.7|199/200|f.35.1.1|1/2|Multidrug efflux transporter AcrB transmembrane domain| HM:SCP:REP 566->675|1iwgA3|0.00044|23.8|101/0|d.58.44.1|1/1|Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains| HM:SCP:REP 719->806|1iwgA6|2.6e-18|37.5|88/88|d.225.1.1|2/2|Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains| HM:SCP:REP 801->1028|1iwgA8|2.4e-45|35.0|217/223|f.35.1.1|2/2|Multidrug efflux transporter AcrB transmembrane domain| OP:NHOMO 4150 OP:NHOMOORG 656 OP:PATTERN -------------------------------------------------------------------- B9F-------------------------------------------11-1--111-11--11--1--1111------------34364EEFC-C22---23F497J9J8C--------------342344433365111111--1-66254341122111534341E4693-2-----2-----211---1121222222222222222-1--212212112112------6311111111111111111111-----------------------------------------------------------------------61-6-------1-1-1222--------1-13122422212-1-----31B3BF77A111119DOIQH7GLGJFD45564664546-JMDELILJ5A9-GAACBBDBBA8A9I69A7475655345555555555AA666B61111111111--1-221111111111-111338926755ADGHFHBA6554DCED888859DAGCEHJ-5GHF7999BLB96859DF9DAC67-------95A6AF74A245764794431684678B678A89C828621--2222212311111115532668875HE9GCBB4DCDDDCEKLDDHHDJNKMG--1A74B------66564B67899788A77-6887789768797777777CDC663456545666666546455964654661-877777765776--17232225989G9C55111112111111111777975922288BCCCCBCEBDFEB89BB111111111B5AAB666669CDCBGHCADAA7AA54542295BB36BB11111111---------------------------------111117C5 -------------1------------------------------------------------------------------------------------------------------------------------------------------------2----8-2-------2--------------9-----6---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 1003 STR:RPRED 96.8 SQ:SECSTR #######cHHHHHHcTTTTTHHHHHHHHHHHHHHHHccccccccccccEEEEccccccccHHHHHTTTHHHHcTTcccccccccccEEEETccEEccEEccTTccEEcHHHHHHHHHHHHHHHGGGccHHHHHHcccEEEcccEEEEEEEccccccHHHHHHHHHTTHHHHHccccccEEEEccGcccccEEEEcHHHHHTTTccHHHHHHHHTTTccccccccccccccccccccccccccHHHHHccEEEccTTTccEEHHHHEEEEcccTcccccEEEETTEEcccEEEEccccccHHHHHHHHHHHHTTTcccccccEEEEccccccHHHHcccccTHHHHHTTcHHHHHHHHHHHc#######ccHHHHHHHHHHHHHHHHHHHHHHHHHTccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHTTccTTHHHHHHHHHTTHHHHTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccTTTTTTTTTTHHHHHHHHHccccTTcTTTHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEccTTccHHHHHHHHHHHHTccccTTTEEEEEEEEEEcccc#cccEEE##EEEEEEEEEEEEccTTTcccGGGcHHHHHHHHTcccTTccTTccccccccEEEEEEcccccTTHHHHHHHHHHHHHHccGGGcccEEcccccEEcccccccHHHHHHTTccHHHHHHHHHHHHHcccccEEEccccEEEccccccGGGcccTTTGGGcEEEcTTccEEEGGGcccccccEEccEEEEETTEEEEEEEEcccccccHHHHHHHHHHHHHHHHHTccTTcEEEEcHHHHHHHcccccHHHHHHHHHHHHHHHHHHHTTcccTTHHHHTTHHHHHHHHcTTccccccccTTHHHHHHHHHHHHHHHHHHHHHHHHTTTTcccccTTTHHHHHHHTTHHHHHHHHHHHHTTcHHHHTcccTTHHHHHHHHHHHHHHHHHHHHHHHHTHH################ DISOP:02AL 1-3,216-221,1022-1037| PSIPRED cccccccHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccHHHcccccccEEEEEEEEccccHHHHHHHHHHHHHHHHHccccEEEEEEEEEccEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHccccccccEEEcccccEEEEEEEEEcccccHHHHHHHHHHHHHHHHcccccEEEEEEccccEEEEEEEcHHHHHHccccHHHHHHHHHHHccccccEEEEcccEEEEEEEccHHccHHHHHcccEEEcccccEEEEEEEEEEEEcccccccccccccccEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEccccccHHHHHHHHHHHHHHHHccccccEEEEEEccccccccccccccccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccEEEEEEEccHHHHHHHHHHHHHHHHccccEEEEEccccccEEEEEEEEcHHHHHHccccHHHHHHHHHHHHcccEEEEEEEccEEEEEEEEEcHHHHccHHHHHccEEEcccccEEEEEEEEEEEEEcccEEEEEcccEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccc //