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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08830.1
DDBJ      :             Alkylhydroperoxidase AhpD core
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  90/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.152.1
:173 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->144 1kncC PDBj 1e-09 31.2 %
:RPS:PDB   89->153 3beyE PDBj 3e-09 27.0 %
:RPS:SCOP  6->155 1gu9A  a.152.1.1 * 8e-17 23.8 %
:HMM:SCOP  3->172 1kncA_ a.152.1.1 * 1.9e-39 31.7 %
:HMM:PFM   93->172 PF02627 * CMD 1.5e-17 29.1 79/85  
:BLT:SWISS 4->154 AHPD_MARMM 2e-19 34.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08830.1 GT:GENE ABF08830.1 GT:PRODUCT Alkylhydroperoxidase AhpD core GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 2122142..2122663 GB:FROM 2122142 GB:TO 2122663 GB:DIRECTION + GB:PRODUCT Alkylhydroperoxidase AhpD core GB:PROTEIN_ID ABF08830.1 GB:DB_XREF GI:93354741 InterPro:IPR003779 InterPro:IPR004675 LENGTH 173 SQ:AASEQ MEFLSTIKNLIPDYAKDIRLNVDGTIARSSLEGNDAVGVALAAAFAAKSKVLVDAIRNANVLSPEEVNGALTAAALMGMNNLWYPYVEMAEDPDLASQPAGLRMNAYATHGGVDKRRFEMYALAASVIGKCHFCIKSHYQLLKTEQGMTAQQLRDVGRIAAVIGAAANVIAAE GT:EXON 1|1-173:0| BL:SWS:NREP 1 BL:SWS:REP 4->154|AHPD_MARMM|2e-19|34.9|149/173| SEG 36->53|avgvalaaafaakskvlv| SEG 156->172|vgriaavigaaanviaa| BL:PDB:NREP 1 BL:PDB:REP 4->144|1kncC|1e-09|31.2|138/173| RP:PDB:NREP 1 RP:PDB:REP 89->153|3beyE|3e-09|27.0|63/86| HM:PFM:NREP 1 HM:PFM:REP 93->172|PF02627|1.5e-17|29.1|79/85|CMD| RP:SCP:NREP 1 RP:SCP:REP 6->155|1gu9A|8e-17|23.8|147/172|a.152.1.1| HM:SCP:REP 3->172|1kncA_|1.9e-39|31.7|167/174|a.152.1.1|1/1|AhpD-like| OP:NHOMO 90 OP:NHOMOORG 90 OP:PATTERN -------------------------------------------------------------------- 1-1--1------1-111-------1------1----11-----1-----------------------11-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-11----1--11111111-111-------------------------1--11----------11111111-11-1-1---------------------------------1--11111111111-111111-11111111111111--111-------------------------------------------------------------1-------------------------------------1--------------------------------------------------------------------------------------------------------------------------111111111-------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 151 STR:RPRED 87.3 SQ:SECSTR ###cHHHHHHccGGGHHHHHHHH#HHTTcccccHHHHHHHHHHHHHHTTcHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHcTTcHHHHHHHHHHHHHHHHHcTTccHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHTTccHHHHHH################## DISOP:02AL 1-1,173-174| PSIPRED ccHHHHHHHHccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHcccccHHHHHHccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccc //