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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08910.1
DDBJ      :             bacterial translation initiation factor 2 (bIF-2)
Swiss-Prot:IF2_RALME    RecName: Full=Translation initiation factor IF-2;

Homologs  Archaea  68/68 : Bacteria  912/915 : Eukaryota  197/199 : Viruses  0/175   --->[See Alignment]
a.6.1b.43.3c.20.1c.37.1
:979 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   479->978 1zo1I PDBj 0.0 63.6 %
:RPS:PDB   476->971 1darA PDBj 2e-62 15.3 %
:RPS:SCOP  404->449 1nd9A  a.6.1.6 * 1e-15 10.9 %
:RPS:SCOP  479->643 1g7rA4  c.37.1.8 * 2e-41 34.4 %
:RPS:SCOP  618->743 1n0uA1  b.43.3.1 * 6e-14 17.1 %
:RPS:SCOP  760->882 1g7rA3  c.20.1.1 * 3e-30 28.0 %
:RPS:SCOP  881->978 1d1nA  b.43.3.1 * 3e-26 62.2 %
:HMM:SCOP  2->51 1nd9A_ a.6.1.6 * 6.6e-12 51.0 %
:HMM:SCOP  408->541 1t9hA2 c.37.1.8 * 1.9e-05 16.9 %
:HMM:SCOP  476->670 1f60A3 c.37.1.8 * 2e-60 42.1 %
:HMM:SCOP  651->735 1g7sA1 b.43.3.1 * 1.2e-25 60.0 %
:HMM:SCOP  755->886 1g7sA3 c.20.1.1 * 4.8e-40 52.0 %
:HMM:SCOP  880->978 1d1nA_ b.43.3.1 * 5e-36 52.5 %
:RPS:PFM   63->100 PF08364 * IF2_assoc 2e-06 57.9 %
:RPS:PFM   402->451 PF04760 * IF2_N 1e-08 48.0 %
:RPS:PFM   484->638 PF00009 * GTP_EFTU 4e-20 38.7 %
:RPS:PFM   767->870 PF11987 * IF-2 2e-31 64.4 %
:HMM:PFM   763->870 PF11987 * IF-2 9.9e-45 61.1 108/109  
:HMM:PFM   483->641 PF00009 * GTP_EFTU 1.7e-44 40.3 159/189  
:HMM:PFM   1->51 PF04760 * IF2_N 5.1e-09 19.6 51/54  
:HMM:PFM   401->452 PF04760 * IF2_N 1.5e-16 38.5 52/54  
:HMM:PFM   669->729 PF03144 * GTP_EFTU_D2 1.5e-11 38.3 60/74  
:HMM:PFM   900->967 PF03144 * GTP_EFTU_D2 9.9e-10 31.3 67/74  
:HMM:PFM   61->101 PF08364 * IF2_assoc 6.7e-18 53.7 41/41  
:BLT:SWISS 1->112,266->979 IF2_RALME 0.0 100.0 %
:PROS 930->952|PS01176|IF2
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08910.1 GT:GENE ABF08910.1 GT:PRODUCT bacterial translation initiation factor 2 (bIF-2) GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(2196681..2199620) GB:FROM 2196681 GB:TO 2199620 GB:DIRECTION - GB:PRODUCT bacterial translation initiation factor 2 (bIF-2) GB:PROTEIN_ID ABF08910.1 GB:DB_XREF GI:93354821 InterPro:IPR000178 InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR006847 LENGTH 979 SQ:AASEQ MASTTVAQLAAELSRSPAALLEQLQAAGVGKATPDDVITESDKTRLLDYLKRSHGQSDDSARKKITLTKRETSEIRQSDSTGKTRTVQVEVRKKRVLIKRDDVESHGDGADSQESAEAAAEEVRRDEEQRREQAEALARQEAEAQAAREAAEREEAERRAKQEALEAEQRRQAELLAQKAAEEAAAAQAAADAAEETAREKAEEDKARLATERAQAQKNADDAKAAVDKARAEQDSAKAAADKARAEQDAAARRRREAAEAEARAIQQMLNAPPRVLKAPSERKAEEKKAEQTGTLHKPVKPAGATTEAKKDDKKAAPAATTTTAAAGDKKGAKGGKTGTWQDEGSRGKKGGGLKTRGDSSGGVGGWRSGPRGRGGKHNADDARSNFQAPTEPVVREVHVPETVSVADLAHKMAVKASEVIKQMMKLGQMVTINQVLDQETAMIVVEEMGHKAFAAKLDDPEALLVVDGEDHGDAEMLPRPPVVTVMGHVDHGKTSLLDYIRRTKVAAGEAGGITQHIGAYHVETDRGVITFLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAITKVDKPEANPDRVKQELVAEQVVPEEYGGESPFVPVSAKTGQGIDDLLENVLLQAEVLELRAPVDAPAKGLVVEAQLDKGKGPIATILVSSGTLKRGDVVLAGSAYGRVRAMLDENGKPSKEAGPSIPVEIQGLSEVPAAGEEVLVLPDERKAREIALFRQGKFRDVKLAKQQAAKLETMLEQMAEGEVQTLPLIVKADVQGSQEALVQSLQKLSTSEVRVQIVHGGVGGISESDVNLATASKAVIIGFNVRADAGARKLAEHNGIDIRYYNIIYDAVDEIKAAMSGMLAPEKRETTIGQVEVRQVFRVPKVGAVAGCMVTDGLIKRNSMVRVLRNNVVIHDGELDSLKRFKDDVKEVKQGFECGLSIKNFNDVQEGDQLEVYEITEVARTL GT:EXON 1|1-979:0| SW:ID IF2_RALME SW:DE RecName: Full=Translation initiation factor IF-2; SW:GN Name=infB; OrderedLocusNames=Rmet_2031; SW:KW Complete proteome; Cytoplasm; GTP-binding; Initiation factor;Nucleotide-binding; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->112,266->979|IF2_RALME|0.0|100.0|826/979| GO:SWS:NREP 5 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0005525|"GO:GTP binding"|GTP-binding| GO:SWS GO:0003743|"GO:translation initiation factor activity"|Initiation factor| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| PROS 930->952|PS01176|IF2|PDOC00905| COIL:NAA 145 COIL:NSEG 1 COIL:REGION 121->265| SEG 113->210|qesaeaaaeevrrdeeqrreqaealarqeaeaqaareaaereeaerrakqealeaeqrrqaellaqkaaeeaaaaqaaadaaeetarekaeedkarla| SEG 214->265|aqaqknaddakaavdkaraeqdsakaaadkaraeqdaaarrrreaaeaeara| SEG 303->340|agatteakkddkkaapaattttaaagdkkgakggktgt| SEG 345->376|gsrgkkggglktrgdssggvggwrsgprgrgg| BL:PDB:NREP 1 BL:PDB:REP 479->978|1zo1I|0.0|63.6|500/501| RP:PDB:NREP 1 RP:PDB:REP 476->971|1darA|2e-62|15.3|489/615| RP:PFM:NREP 4 RP:PFM:REP 63->100|PF08364|2e-06|57.9|38/41|IF2_assoc| RP:PFM:REP 402->451|PF04760|1e-08|48.0|50/52|IF2_N| RP:PFM:REP 484->638|PF00009|4e-20|38.7|155/183|GTP_EFTU| RP:PFM:REP 767->870|PF11987|2e-31|64.4|104/111|IF-2| HM:PFM:NREP 7 HM:PFM:REP 763->870|PF11987|9.9e-45|61.1|108/109|IF-2| HM:PFM:REP 483->641|PF00009|1.7e-44|40.3|159/189|GTP_EFTU| HM:PFM:REP 1->51|PF04760|5.1e-09|19.6|51/54|IF2_N| HM:PFM:REP 401->452|PF04760|1.5e-16|38.5|52/54|IF2_N| HM:PFM:REP 669->729|PF03144|1.5e-11|38.3|60/74|GTP_EFTU_D2| HM:PFM:REP 900->967|PF03144|9.9e-10|31.3|67/74|GTP_EFTU_D2| HM:PFM:REP 61->101|PF08364|6.7e-18|53.7|41/41|IF2_assoc| GO:PFM:NREP 4 GO:PFM GO:0003743|"GO:translation initiation factor activity"|PF04760|IPR006847| GO:PFM GO:0006413|"GO:translational initiation"|PF04760|IPR006847| GO:PFM GO:0003924|"GO:GTPase activity"|PF00009|IPR000795| GO:PFM GO:0005525|"GO:GTP binding"|PF00009|IPR000795| RP:SCP:NREP 5 RP:SCP:REP 404->449|1nd9A|1e-15|10.9|46/49|a.6.1.6| RP:SCP:REP 479->643|1g7rA4|2e-41|34.4|157/212|c.37.1.8| RP:SCP:REP 618->743|1n0uA1|6e-14|17.1|123/138|b.43.3.1| RP:SCP:REP 760->882|1g7rA3|3e-30|28.0|118/131|c.20.1.1| RP:SCP:REP 881->978|1d1nA|3e-26|62.2|98/99|b.43.3.1| HM:SCP:REP 2->51|1nd9A_|6.6e-12|51.0|49/49|a.6.1.6|1/2|Putative DNA-binding domain| HM:SCP:REP 408->541|1t9hA2|1.9e-05|16.9|130/0|c.37.1.8|1/2|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 476->670|1f60A3|2e-60|42.1|195/239|c.37.1.8|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 651->735|1g7sA1|1.2e-25|60.0|85/101|b.43.3.1|1/2|Translation proteins| HM:SCP:REP 755->886|1g7sA3|4.8e-40|52.0|125/131|c.20.1.1|1/1|Initiation factor IF2/eIF5b, domain 3| HM:SCP:REP 880->978|1d1nA_|5e-36|52.5|99/99|b.43.3.1|2/2|Translation proteins|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a613772421744545232352162754248547854866N55769886*A7768D9BG4DB66B5767 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 603 STR:RPRED 61.6 SQ:SECSTR ########################################################################################################################################################################################################################################################################################################################################################################################TEEEEEEHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccGGGHHHHHHHHHTcccTTccccHHHHHHHHHHHHTcHHHHccGGGEEEEEEEEcTTccHHHHHHHHHHHHccccEEEEEETTEEEEHTTccEEEEEEcTTcTTccHHHHHHHHHHTTcccEEEcEEEEccGGEEETTTTEEEEEccTTcccEEEEcccGGGHHHHHHHHHHHHHHHTTTcHHEEEEEccGGGTccHHHHHHHHHccccEEEEcccTTcccEEEEEEEEEETTTEEEEEEEEEEcEEEcccEEEETTTccEEEEEccccEEEEcEEETTcEEEEEccccccTccTcEEETTcccccccccccccEEEccEEEEEcccccccEEEcTTTcccccccEEEccccEEEEEEEEEccccccEEEEEEEEEEEccTTccEEHHHHHHHTTccTTTccccccEEEEEEEEcccTTTccHHHHHHHHHHHHHHHHHTcccEEEEEEEEEEEEEcTTTTTHHHHHHHHTTccEETTEEEEEEEETTEEEEEEEEETTTcccHHHHHHHHTTTcEEEEEEEEEEEccHHHHHHHHcTEEEEEEc DISOP:02AL 1-2,52-64,73-85,99-264,273-320,322-361,365-397,474-474,763-772,979-980| PSIPRED ccccHHHHHHHHHcccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHccccccccccEEEEEEEEEEEEEEEcccccEEEEEEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHccccccccccHHHHHHcccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccEEEEcccEEHHHHHHHHcccHHHHHHHHHHccccccccccccHHHHHHHHHHcccEEEEEEccHHHHHHHHccccccccHHHccccEEEEEccccccHHHHHHHHHHHHHHHHHccccEEEEccEEEEccccEEEEEccccHHHHHHHHHHHHHHccEEEEEEEccccccHHHHHHHHHHHHccccEEEEEEEcccccccHHHHHHHHHHHHcccccccccccEEEEcccccccHHHHHHHHHHHHcccccccccccccEEEEEEEEEEccccEEEEEEEEEcEEccccEEEEEccccEEEEEEccccEEEHHcccccEEEEEccccccccccEEEEEccccHHHHHHHHHccHHHHHHHHHHHHHcHHHHHHHHcccccEEccEEEEccccccHHHHHHHHHHccccccEEEEEEcccccccHHHHHHHHHcccEEEEEEccccHHHHHHHHHcccEEEEEHHHHHHHHHHHHHHHHccccEEEEEEEEEEEEEEEEEcccccEEEEEEEEEEEEEcccEEEEEEccEEEEEEEEEHHHHccccHHHHccccEEEEEEEcccccccccEEEEEEEEEEEEcc //