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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08923.1
DDBJ      :             cytochrome c oxidase, cbb3-type, subunit I
Swiss-Prot:             

Homologs  Archaea  23/68 : Bacteria  326/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
f.24.1
:482 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   205->398 1m57A PDBj 4e-10 26.1 %
:RPS:SCOP  161->448 1ar1A  f.24.1.1 * 4e-35 15.2 %
:HMM:SCOP  11->471 1ehkA_ f.24.1.1 * 1.2e-120 27.7 %
:RPS:PFM   207->396 PF00115 * COX1 8e-08 21.6 %
:HMM:PFM   17->448 PF00115 * COX1 7.2e-76 24.9 417/447  
:BLT:SWISS 13->477 FIXN_AZOC5 e-180 62.1 %
:PROS 207->262|PS00077|COX1_CUB
:TM
:REPEAT 2|207->300|345->451

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08923.1 GT:GENE ABF08923.1 GT:PRODUCT cytochrome c oxidase, cbb3-type, subunit I GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(2210881..2212329) GB:FROM 2210881 GB:TO 2212329 GB:DIRECTION - GB:PRODUCT cytochrome c oxidase, cbb3-type, subunit I GB:PROTEIN_ID ABF08923.1 GB:DB_XREF GI:93354834 InterPro:IPR000883 InterPro:IPR004677 LENGTH 482 SQ:AASEQ MAVTTASSRADTFNYGVVRQFAVMTVVWGIVGMAVGVLLAAQLIWPDLNFNTPWLSFGRLRPLHTNAVIFAFGGSALFATSYYVVQRTCQARLFCGPLASFTFWGWQAIIIAAVITLPMGITSSKEYAELEWPIDILITLVWVAYAVVFFGTIIKRKTRHIYVANWFFGAYILTIAILHIVNNIEMPVSMWKSYSAYAGVQDAMIQWWYGHNAVGFFLTTSFLGMMYYFIPKQAERPIYSYRLSIVHFWALNFTYMWAGPHHLQYTSLPDWAQSLGMVFSLILLAPSWGGMINGIMTLSGAWHKLRTDPILKFLVVALSFYGMATFEGSMMSIKTVNALSHYTDWTIGHVHSGALGWVAMISIGSLYYLIPRLFGEKEMYSTRLIEWHFWIATIGVVLYIASMWIAGVMEGLMWRATQPDGTLTYAFVEAVKAKYPFYLIRLLGGLCFLSGMILMAYNVARTIIGKPAVDAPIPANLPASAH GT:EXON 1|1-482:0| BL:SWS:NREP 1 BL:SWS:REP 13->477|FIXN_AZOC5|e-180|62.1|464/551| PROS 207->262|PS00077|COX1_CUB|PDOC00074| TM:NTM 11 TM:REGION 20->42| TM:REGION 65->87| TM:REGION 103->125| TM:REGION 132->154| TM:REGION 161->183| TM:REGION 210->232| TM:REGION 276->298| TM:REGION 306->326| TM:REGION 351->373| TM:REGION 389->411| TM:REGION 437->459| NREPEAT 1 REPEAT 2|207->300|345->451| BL:PDB:NREP 1 BL:PDB:REP 205->398|1m57A|4e-10|26.1|188/547| RP:PFM:NREP 1 RP:PFM:REP 207->396|PF00115|8e-08|21.6|185/423|COX1| HM:PFM:NREP 1 HM:PFM:REP 17->448|PF00115|7.2e-76|24.9|417/447|COX1| GO:PFM:NREP 5 GO:PFM GO:0005506|"GO:iron ion binding"|PF00115|IPR000883| GO:PFM GO:0009055|"GO:electron carrier activity"|PF00115|IPR000883| GO:PFM GO:0009060|"GO:aerobic respiration"|PF00115|IPR000883| GO:PFM GO:0016021|"GO:integral to membrane"|PF00115|IPR000883| GO:PFM GO:0020037|"GO:heme binding"|PF00115|IPR000883| RP:SCP:NREP 1 RP:SCP:REP 161->448|1ar1A|4e-35|15.2|283/529|f.24.1.1| HM:SCP:REP 11->471|1ehkA_|1.2e-120|27.7|451/549|f.24.1.1|1/1|Cytochrome c oxidase subunit I-like| OP:NHOMO 579 OP:NHOMOORG 351 OP:PATTERN ------3222222215-11-1---111311-1-----------------------------1----11 --22-------------------------------------------------------------------------------11111---------111-132132212--------------11-11-1--1--111-----1-132111111221-121121125342-----11-1-1111-11---11----------------1111-------111-2------------------------------------------------------------------------------------------------------------------------------1---------------------2-21111------32221-22111211111111111---21-3--222--22142342254111112111111112--------------11-------------------------------111--11-41------1111----111112--21113112122121111222112243322211111111315131-1----------1-313------11111---1111111111111111111111-11--11-332322222322222222222233222---22-2--------------------------------------------------------------------------------------------2-----2222123------------------------1112266663445433335111---------1111311111323221111111111----221-1111------------------------------------------------23- --------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------1------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 204 STR:RPRED 42.3 SQ:SECSTR ############################################################################################################################################################################################################HHHTTTTHHHHHHHHHHH#HHHHHHHHHHTTcccTTHHHHHHHHHHHHHHTTccGGGGGTTccccHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTccccccHcHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHTTcHHHHHHHHHHHTTHHHHHHHHTHHHHTTTTTcEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHT######################################################################### DISOP:02AL 1-10,475-483| PSIPRED ccccccccccccccccEEEEEccHHHHHHHHHHHHHHHHHHHHHccHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHccccccccHHHHHHHHHHHHHHHHHHHHHccccEEHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccc //