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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08928.1
DDBJ      :             2-oxoglutarate dehydrogenase E2 component
Swiss-Prot:ODO2_RALEH   RecName: Full=Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex;         Short=E2;         EC=2.3.1.61;AltName: Full=Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex;

Homologs  Archaea  22/68 : Bacteria  781/915 : Eukaryota  192/199 : Viruses  0/175   --->[See Alignment]
a.9.1b.84.1c.43.1
:419 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->77 1ghjA PDBj 4e-21 51.4 %
:BLT:PDB   188->419 1sczA PDBj 3e-92 65.5 %
:RPS:PDB   1->78 3bg5A PDBj 4e-14 24.4 %
:RPS:PDB   123->150 2btgA PDBj 4e-06 50.0 %
:RPS:PDB   192->416 1c4tA PDBj 3e-87 63.1 %
:RPS:SCOP  2->79 1gjxA  b.84.1.1 * 5e-14 29.9 %
:RPS:SCOP  123->150 1ebdC  a.9.1.1 * 4e-06 42.9 %
:RPS:SCOP  188->416 1c4tA  c.43.1.1 * 3e-92 65.5 %
:HMM:SCOP  1->99 1y8oB1 b.84.1.1 * 1.5e-24 43.4 %
:HMM:SCOP  106->156 1balA_ a.9.1.1 * 2.1e-09 41.2 %
:HMM:SCOP  176->417 1eafA_ c.43.1.1 * 8.7e-91 51.5 %
:RPS:PFM   6->75 PF00364 * Biotin_lipoyl 3e-08 38.6 %
:RPS:PFM   190->417 PF00198 * 2-oxoacid_dh 2e-68 57.3 %
:HMM:PFM   189->417 PF00198 * 2-oxoacid_dh 1.1e-82 49.1 228/231  
:HMM:PFM   5->77 PF00364 * Biotin_lipoyl 2.2e-24 38.4 73/74  
:HMM:PFM   116->151 PF02817 * E3_binding 3.4e-17 61.1 36/39  
:BLT:SWISS 1->419 ODO2_RALEH e-178 95.4 %
:PROS 28->57|PS00189|LIPOYL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08928.1 GT:GENE ABF08928.1 GT:PRODUCT 2-oxoglutarate dehydrogenase E2 component GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(2218115..2219374) GB:FROM 2218115 GB:TO 2219374 GB:DIRECTION - GB:PRODUCT 2-oxoglutarate dehydrogenase E2 component GB:PROTEIN_ID ABF08928.1 GB:DB_XREF GI:93354839 InterPro:IPR000089 InterPro:IPR001078 InterPro:IPR003016 InterPro:IPR004167 InterPro:IPR006255 LENGTH 419 SQ:AASEQ MAIVDVKVPQLSESVAEATMLNWKKKPGEAVAQDEILIEIETDKVVLEVPAPSAGVLSQIIKNDGDTVVADEVIAKIDTAATAGAVAPAAAAPAPAAAAPAPAAAAPAAAASAGAIAMPSAAKLMAEGGLSASQVAGTGKDGRITKGDVLAAGSAPAPAAKAAPAPAAAKPALPQVSAQVDFAALGDRPEERVPMSRLRARIAERLIQSQSTNAILTTFNEVNMKPVMDLRAKYKDRFEKEHGVKLGFMSFFVKAAVHALKKYPVINASVDGNDIVYHGYFDIGIAVGSPRGLVVPILRNADQMSLADIEKKIAEFGTKARDGKLSLEELTGGTFSISNGGTFGSMLSTPIINPPQSAILGVHATKDRAVVEDGQIVIRPMNYLAMSYDHRIIDGREAVLGLVAMKEALEDPARLLLDL GT:EXON 1|1-419:0| SW:ID ODO2_RALEH SW:DE RecName: Full=Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; Short=E2; EC=2.3.1.61;AltName: Full=Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex; SW:GN Name=sucB; Synonyms=odhB; OrderedLocusNames=H16_A2324; SW:KW Acyltransferase; Complete proteome; Lipoyl; Transferase;Tricarboxylic acid cycle. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->419|ODO2_RALEH|e-178|95.4|416/416| GO:SWS:NREP 4 GO:SWS GO:0008415|"GO:acyltransferase activity"|Acyltransferase| GO:SWS GO:0031405|"GO:lipoic acid binding"|Lipoyl| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| GO:SWS GO:0006099|"GO:tricarboxylic acid cycle"|Tricarboxylic acid cycle| PROS 28->57|PS00189|LIPOYL|PDOC00168| SEG 80->122|aatagavapaaaapapaaaapapaaaapaaaasagaiampsaa| SEG 151->172|aagsapapaakaapapaaakpa| BL:PDB:NREP 2 BL:PDB:REP 4->77|1ghjA|4e-21|51.4|74/79| BL:PDB:REP 188->419|1sczA|3e-92|65.5|232/233| RP:PDB:NREP 3 RP:PDB:REP 1->78|3bg5A|4e-14|24.4|78/1137| RP:PDB:REP 123->150|2btgA|4e-06|50.0|28/45| RP:PDB:REP 192->416|1c4tA|3e-87|63.1|225/226| RP:PFM:NREP 2 RP:PFM:REP 6->75|PF00364|3e-08|38.6|70/74|Biotin_lipoyl| RP:PFM:REP 190->417|PF00198|2e-68|57.3|227/232|2-oxoacid_dh| HM:PFM:NREP 3 HM:PFM:REP 189->417|PF00198|1.1e-82|49.1|228/231|2-oxoacid_dh| HM:PFM:REP 5->77|PF00364|2.2e-24|38.4|73/74|Biotin_lipoyl| HM:PFM:REP 116->151|PF02817|3.4e-17|61.1|36/39|E3_binding| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00198|IPR001078| GO:PFM GO:0008415|"GO:acyltransferase activity"|PF00198|IPR001078| RP:SCP:NREP 3 RP:SCP:REP 2->79|1gjxA|5e-14|29.9|77/81|b.84.1.1| RP:SCP:REP 123->150|1ebdC|4e-06|42.9|28/41|a.9.1.1| RP:SCP:REP 188->416|1c4tA|3e-92|65.5|226/226|c.43.1.1| HM:SCP:REP 1->99|1y8oB1|1.5e-24|43.4|99/0|b.84.1.1|1/1|Single hybrid motif| HM:SCP:REP 106->156|1balA_|2.1e-09|41.2|51/51|a.9.1.1|1/1|Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex| HM:SCP:REP 176->417|1eafA_|8.7e-91|51.5|241/243|c.43.1.1|1/1|CoA-dependent acyltransferases| OP:NHOMO 2754 OP:NHOMOORG 995 OP:PATTERN 11------1111111---111---2111--11----------------------------1111---- 1223522222223242333-322243333333444435763444344433335564452244434364644-----------4---1-111--1--22233334333333333333333333332---1----12-34433---221111111111111111111121121111111111111333331--424444444443444444474454444455344322222242233333333333333344432-1-22-1---111111111111111222212123322222-222221111111111111311111111211---1111111-1--111---------3--------------11311-13-2422222222224223222222244444433443-225225232422233232533344223333242222232333333332222222222222222221222222222222222222235931232233443443333322243333243333334233332222222444222221112322222222223322-1-2----------323133421333333-21---------------------111113223323343434333343333333333441-2422222222232222222222233322-222223322223222222323322232222222222222222222222222222222222222222223333333333223232222222222222223333323222324444333333333222222222222211223222223323333333332222222111-222221----------111111-1-11111111211111-------------222 22--444-733-3333342343354533333333333423333333223444443333333332222222222222222222222222-24232222222222545-3548466656444324445484Ad4-74C3442524644444444253953449F37343434B54554734w434558AFD3B55484564 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 354 STR:RPRED 84.5 SQ:SECSTR cccccTTcTTEEEccccEEEEEEcccTTcEEcTTcEEEEEEccccEEEEEccccEEccEEcccTTcEEcTTcEEEEccc###########################################HHHHHHTccGGGcccccTTccccHHHHH######################cccccccccGccTTccccccccccccccHHHHHHHHHHHcccEEEEEEEEEcHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcHHHHcEEETTEEEccccccEEEcEEETTEEEccEEccTTTccHHHHHHHHHHHHHHHHTTcccTTTTccccEEEEEcGGGTcccccccccTTccEEEEEcccEEEEEEETTEEEEEEEEEEEEEEETTTccHHHHHHHHHHHHHHHTcGGGTcccc DISOP:02AL 1-1,159-192| PSIPRED ccEEEEEcccccccccEEEEEEEEcccccEEccccEEEEEEccccEEEEEcccccEEEEEEcccccccccccEEEEEEcccccccccccccccccccccccccccccHHHcccccccccHHHHHHHHHcccHHHccccccccEEEHHHHHHcccccccccccccccccccccccccccccccccccccccEEEEcHHHHHHHHHHHHHHcccccEEEEEEEEEcHHHHHHHHHHHHHHHHHcccEEEHHHHHHHHHHHHHHHcccEEEEEEcccEEEcccccEEEEEEccccEEEEEEcccHHccHHHHHHHHHHHHHHHHcccccHHHHccccEEEEcccccccccEEcccccccEEEEEEcccEEEEEEEccEEEEEEEEEEEEEEcccEEEHHHHHHHHHHHHHHHHHHHHHHHcc //