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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08953.1
DDBJ      :             respiratory nitrate reductase alpha subunit apoprotein
Swiss-Prot:             

Homologs  Archaea  16/68 : Bacteria  274/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
b.52.2c.81.1
:1252 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->1232 1q16A PDBj 0.0 68.3 %
:RPS:PDB   19->340 1bp5C PDBj 1e-34 7.9 %
:RPS:PDB   346->1116 2eabA PDBj 2e-92 9.4 %
:RPS:PDB   1092->1206 1cz4A PDBj 1e-15 12.5 %
:RPS:SCOP  2->1072 1q16A2  c.81.1.1 * 0.0 66.4 %
:RPS:SCOP  1073->1237 1q16A1  b.52.2.2 * 5e-38 73.3 %
:HMM:SCOP  2->1072 1q16A2 c.81.1.1 * 0 44.0 %
:HMM:SCOP  1073->1242 1q16A1 b.52.2.2 * 1.1e-48 32.9 %
:RPS:PFM   149->356,660->822 PF00384 * Molybdopterin 8e-31 54.1 %
:RPS:PFM   502->573 PF00384 * Molybdopterin 4e-07 34.7 %
:RPS:PFM   1113->1192 PF01568 * Molydop_binding 2e-05 37.5 %
:HMM:PFM   108->828 PF00384 * Molybdopterin 4.1e-160 49.5 424/432  
:HMM:PFM   1084->1199 PF01568 * Molydop_binding 2.2e-24 31.4 105/109  
:HMM:PFM   53->105 PF04879 * Molybdop_Fe4S4 5.4e-06 37.0 46/55  
:BLT:SWISS 1->1232 NARG_ECOLI 0.0 68.3 %
:PROS 48->66|PS00551|MOLYBDOPTERIN_PROK_1
:PROS 1122->1149|PS00932|MOLYBDOPTERIN_PROK_3

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08953.1 GT:GENE ABF08953.1 GT:PRODUCT respiratory nitrate reductase alpha subunit apoprotein GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 2250389..2254147 GB:FROM 2250389 GB:TO 2254147 GB:DIRECTION + GB:PRODUCT respiratory nitrate reductase alpha subunit apoprotein GB:PROTEIN_ID ABF08953.1 GB:DB_XREF GI:93354864 InterPro:IPR006468 InterPro:IPR006655 InterPro:IPR006656 InterPro:IPR006657 InterPro:IPR006963 LENGTH 1252 SQ:AASEQ MSHFLDRLKFLSRVKSTYSDGHGAVVNEDRKWENTYRSRWQHDKIVRSTHGVNCTGSCSWKVYVKNGLITWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYVYSAQRVKYPMIRGRLMEMWREARKTMDPISAWESISQNPEKARRYKSVRGQGGFVRADWQTATEIIAAANAYTIKQYGPDRVIGFSPIPAMSMVSYAAGARYLSLIGGACLSFYDWYCDLPPASPQIWGEQTDVPESADWYNSTYLMVWGSNVPQTRTPDAHFYTEVRYKGTKTVAVSSDFGEMVKFGDIWLAPKQGTDAALAMAMGHVVLKEFHATGKSAYFRDYVKQYTDMPLLVLLREQDGTLVPDHFLRASHLDGNLDQANHPEWKTLAIDDATGEIVAPNGSIGFRWGEAAHDNGAKVGRWNLEMKDGGSGREIDQRLSLIGHEDEVVEVGFPYFGGEHDALLKRRVPTRRLTLADGTTVHVATVYDLQMANYGVDQGLGGPNVATSYDDDVPYTPAWQEKHTSVPRNLVIQVAREFADNADRTQGKSMVIVGAALNHWYHNDMIYRGIINLLMMCGCIGKSGGGWAHYVGQEKLRPQFGWAPLAFGLDWSRPPRHMNGTSFFYNHTSQWRHEKLGVDEILAPTADRARYDKLSLLDLNAKSERMGWLPSAPQLGRNPLDVVAEARAAGKDPIADTVEQLKSGKLQFACDDPDNPANFPRNMFVWRSNILGSSGKGHEYFLKYLLGTQNAVFGDENDAIKPSEVTVRPAAEGKLDLLTVLDFRMSTTCLYGDIVLPTATWYEKDDLNTSDMHPFIHPLSEAVQPLWESKTDWEIYKAIAKTFSEIAGPYLGTREDLVCTPLLHDTPGELGQPFEPKDWKHGECDLIPGKTAPSMTVVERNYHDIYKKFTSIGPLLDKLGNGGKGINWNTEHEVHEIGHLSKTVTEPGVSQGRPRLETAIDAAEMILTFAPETNGHVAVKAWDALSKITGRDHTHLAVGREHDKIRFRDVQAQPRKIISAPTWSGLESEEVSYNAGYTNVHELIPWRTLTGRQQFYQDHRWMLDFGEGACVYKPAIDTKTISPMLGKKPNGNPELVLNWITPHQKWGIHSTYSDNLRMLTLSRGGPHVWISEVEAKANGIRDNDWVEVFNVNGTLTARVVVSQRVPQGMCLMYHAQEKIVNVPGAETSGMRGGIHNSVTRAVTKPTHMIGGYAQLAYGFNYYGTVGSNRDEFVILRKMNKVDWLDQPLREERTPANEAEKIEGAR GT:EXON 1|1-1252:0| BL:SWS:NREP 1 BL:SWS:REP 1->1232|NARG_ECOLI|0.0|68.3|1221/1247| PROS 48->66|PS00551|MOLYBDOPTERIN_PROK_1|PDOC00392| PROS 1122->1149|PS00932|MOLYBDOPTERIN_PROK_3|PDOC00392| BL:PDB:NREP 1 BL:PDB:REP 2->1232|1q16A|0.0|68.3|1220/1244| RP:PDB:NREP 3 RP:PDB:REP 19->340|1bp5C|1e-34|7.9|277/334| RP:PDB:REP 346->1116|2eabA|2e-92|9.4|732/888| RP:PDB:REP 1092->1206|1cz4A|1e-15|12.5|112/185| RP:PFM:NREP 3 RP:PFM:REP 149->356,660->822|PF00384|8e-31|54.1|354/423|Molybdopterin| RP:PFM:REP 502->573|PF00384|4e-07|34.7|67/423|Molybdopterin| RP:PFM:REP 1113->1192|PF01568|2e-05|37.5|72/112|Molydop_binding| HM:PFM:NREP 3 HM:PFM:REP 108->828|PF00384|4.1e-160|49.5|424/432|Molybdopterin| HM:PFM:REP 1084->1199|PF01568|2.2e-24|31.4|105/109|Molydop_binding| HM:PFM:REP 53->105|PF04879|5.4e-06|37.0|46/55|Molybdop_Fe4S4| GO:PFM:NREP 4 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00384|IPR006656| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00384|IPR006656| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01568|IPR006657| GO:PFM GO:0030151|"GO:molybdenum ion binding"|PF01568|IPR006657| RP:SCP:NREP 2 RP:SCP:REP 2->1072|1q16A2|0.0|66.4|1060/1074|c.81.1.1| RP:SCP:REP 1073->1237|1q16A1|5e-38|73.3|165/170|b.52.2.2| HM:SCP:REP 2->1072|1q16A2|0|44.0|1060/1074|c.81.1.1|1/1|Formate dehydrogenase/DMSO reductase, domains 1-3| HM:SCP:REP 1073->1242|1q16A1|1.1e-48|32.9|170/170|b.52.2.2|1/1|ADC-like| OP:NHOMO 434 OP:NHOMOORG 293 OP:PATTERN 11-------11-------1221111112-11------------------------------------- ----1-11111----1122-21---122222-11111--22----11-1-----1-----21111-1-3----------1631-1111--------------------------------------------------------------------------------------------------11-----11111112111111111-11-11111-2------------1111111111--1111111--------1---11-1-----------------------------------------------------------------------------------2----ED------13----------1--1------1---321-----11221122211---1--1-1----------------1--11--111111----------1----------------------------------------------21--1-11111111-122221211-1121--121-11111111--1--1-1-1-----------3-1--11------1--1----22----1111----------------------------------11-------------2-11------11----1--------311112-2222222222-222222222222212222133311--2323333323223333221-11122---11111111111---1----------111-----------------------1----1111---------1---------------------------11-------------1--------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--1-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 1248 STR:RPRED 99.7 SQ:SECSTR #cHHHHGGGTGGGEEccTcHHHHHHHHHHHHHHHHHHHHcccTEEEEEEcccccTTccEEEEEEcTTccEEEEEcccTTEEEccccccTTcccHHHHTHHHHHTcTTcccccEEEHHHHHHGGGcccGGGcTTEEEEETTEEEEEEEccccTTcccEEEccHHHHHHHHHHHHHHHHHHHcGGGEEEEEccGGGTcccTTHHHHHHHHHTcccEEcGGGGTTHHHHHHHHHHHcccEEEGGcTTTccEEEEEcccccTTcHHHHHHHHHHHHHTcEEEEEcccccHHHHHccEEEcccTTcHHHHHHHHHHHHHHTTcccHHHHccHHHHHHHEEcHTTHHHHHHccccTTccEEEEccccHGGGccccccccTTcccHHHHcEEEEcccEEEEEGGGcccccccEEEEEEEETTcccccTcTccccccTTccHHHHGGGHHHHHHHHHHHTTccccccTTccccccHHHHHccccccEEEEEEccccccEEEEEEETTTEEEEEEEETTEEEEEEEEEETTTTEEEEEccTTcEEEEEEccccTTccEEEEEEEEETTEEEEEEEETTTccGGcEEEEEEEEEEGGGccEEEEcTTcccEEEEEEEEEEEEEEEcccccTTTccccccHHHHHHTTcGGGHHHHHHHHHHHHcHHHHHHHHTTcEEEcccccTTcTTccTTccHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHHccTTccccccTTcTccccccccTTcGGGGcEETTTHHHHTccTTTTTcGGGGHHHHHHHHHTHHHHHHHHHHHHccccccTTTccTTcccccccccccEEcTTccccccccHHHHHHTTccHHHHHHHccTTHHHHHHHHHHcHHHHTTccHHHHHHHHHHHHHHHHGHHHHHTcEEccGGGcccEEccEEEETTEEEEEEEccHHHHHHHHHHHHHHHHHHTTcTTccccccTTccGGGGcccTTcccccTTcHcccHHHHHHHHccccccTTccccccTTcccTTccTTcccccTTccccccGGGTTTTTcccccTTcHHHHHHHHHHHHHHHEETTEEccccHHHHHHHHHHHTTcHHHHHHHHHHHHHHcccTTcccccccccTHHHHHHHHEcHHHHHHTTccTTcEEEEEccccEEEEEEEEcTTccTTEEEccTTcccccccTTcTTcccccccGGGcccccEcccTTTccccTccccHHHTHEHHHccccccEEETTcccEEEETTEEEEEEEEEcTTccE### DISOP:02AL 1-1,1236-1253| PSIPRED cHHHHHHHHHccccccccccccHHHHHccccHHHHHHcccccccEEEEEccccccccccEEEEEEccEEEEEEccccccccccccccccccccHHHHHHHHHHHcccHHcccccccccccccHHHcccccccHHHHHHHHHHHHHcccccccccccEEEEcHHHHHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHEEcccccccHHHHHcccEEEEEcccHHHHccHHHHHHHHHHHcccEEEEEcccccHHHHHHcEEEccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHcccHHHHHccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccEEEccccEEEEEcccccEEEEEEHHHHHHHHHHcccccccccccccHHHcccccHHHHHHHHcccHHHHHHHHHHHHHccccccccEEEEEccHHccEEccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccHHHHHHHHHHccccHHHHHHHHHHcccccccccccccccccccEEEEEcccccccccccHHHHHHHHHcccccccccccccccccHHHHHHHHHHcccEEEEEEccccHHHHHcccccccccHHHHccEEEEcccccEEEcccccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHcccHHHHHcccccccccccccccccccccccEEEEccccHHHHHHHHHccccHHccccccccccccHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccHHHccccccccEEEEHHcccccEEEEEcccccccccccccccccccccccccccccccccEEEEEccHHHHHccccccccccccccccccccccccccccccccEEEEccccccccccEEcccHHHHHHHccccEEEEcHHHHHHHccccccEEEEEccccEEEEEEEEcccccccEEEEEcccccccccccccccccccccccEEccccccHHHHccccccEEEEcccccccccccccEEEEEEHHHcccccccccccccccccHHHccccc //