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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08959.1
DDBJ      :             cytochrome d1, heme region
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  45/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
b.69.2b.70.2
:390 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   32->361 1n15A PDBj 9e-09 26.8 %
:RPS:PDB   64->382 2bbkH PDBj 2e-10 14.1 %
:RPS:SCOP  31->388 1jmxB  b.69.2.2 * 4e-21 19.2 %
:HMM:SCOP  1->390 1qksA2 b.70.2.1 * 1.1e-76 31.5 %
:RPS:PFM   120->363 PF02239 * Cytochrom_D1 5e-10 30.7 %
:HMM:PFM   25->384 PF02239 * Cytochrom_D1 1.2e-101 34.6 355/369  
:HMM:PFM   1->22 PF08085 * Entericidin 8.2e-05 40.9 22/42  
:BLT:SWISS 23->390 NIRF_PSEST e-125 55.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08959.1 GT:GENE ABF08959.1 GT:PRODUCT cytochrome d1, heme region GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 2258237..2259409 GB:FROM 2258237 GB:TO 2259409 GB:DIRECTION + GB:PRODUCT cytochrome d1, heme region GB:PROTEIN_ID ABF08959.1 GB:DB_XREF GI:93354870 InterPro:IPR003143 LENGTH 390 SQ:AASEQ MRRTALPVVLALSALLAGCATAVRGTGDMGVVVERAAGRIQVVETSGMTRLATIDGFGDLSHASVVFARDGRYAYVFGRDGGLTRVDLLNAKVTHRTIQAGNSIGGAITQDGRVVAAQNYEPGGIRLFDAATLEPLADIPAIGPDGRRSKVVGLADLPGKRLAASLFEAGEIWIIDVADPRHPKVTKLPAGKQPYDGLVTPDGRWYLAGLFGEDGLALVDLWQSPPAARHVLSGYGRGSAPLPVYKMPHLRGWAMAQGKAWLPAIGRHEVLIADTANGWQEAGRVEVAGQPVFVMAQPDGRQVWVNFAFPNNETVQVIDTATRKVVRTLKPCRGVLHMEFTPKGEAVWLSCRDDNRVVVYDTTSYEPLATLPADHPSGIFFTSRAQRFGM GT:EXON 1|1-390:0| BL:SWS:NREP 1 BL:SWS:REP 23->390|NIRF_PSEST|e-125|55.6|367/391| TM:NTM 1 TM:REGION 4->26| SEG 5->22|alpvvlalsallagcata| BL:PDB:NREP 1 BL:PDB:REP 32->361|1n15A|9e-09|26.8|310/538| RP:PDB:NREP 1 RP:PDB:REP 64->382|2bbkH|2e-10|14.1|313/355| RP:PFM:NREP 1 RP:PFM:REP 120->363|PF02239|5e-10|30.7|228/268|Cytochrom_D1| HM:PFM:NREP 2 HM:PFM:REP 25->384|PF02239|1.2e-101|34.6|355/369|Cytochrom_D1| HM:PFM:REP 1->22|PF08085|8.2e-05|40.9|22/42|Entericidin| RP:SCP:NREP 1 RP:SCP:REP 31->388|1jmxB|4e-21|19.2|307/339|b.69.2.2| HM:SCP:REP 1->390|1qksA2|1.1e-76|31.5|371/0|b.70.2.1|1/1|C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase| OP:NHOMO 85 OP:NHOMOORG 49 OP:PATTERN ---------------------------------------------------11--------------- --------------------------------------------------------------1----1----------------11-2---------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-------------------------------------------------2-2----2-2------------12-----------------------------------------3------------------------2234--11-1--33--1-----221--------------1-3----------------------------------------------------2--12------2-3--------------------------------------------------------------------------------------------------------------------------------------2-----------------------------2232-----11112---------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------2---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 359 STR:RPRED 92.1 SQ:SECSTR ########################EEETTTEEEEEEcccccHHHHHHHcHHHTHHHHcTTccccccccccTTEEEEGcccEEEEEEETTTTEEEEcEEEEccccEEEEcTTcccEEEEEEEEEEEEEEcTTTccEEEEEEEEcccETTcccccccccGGGEEEcTTccEEEEEEcccccEEEEEEEcccEEEEEEEETTEEEEEETTccEEEEEcccccccEEEEccccccTTcccccccEEETTTTEEEEEcTTcEEEEEEcTTcccEEcccEEcccHHHHHTTEEEcccccEEEETTTTEEEEEEEEccTTEEEEEETTTccEEEEEEEEEEEcEEEEccccccEEEEETTTTEEEEEETTTccEEEEEcccccccEEEcT####### DISOP:02AL 1-4,390-391| PSIPRED cccccccHHHHHHHHHHHHHccccccccEEEEEEccccEEEEEEccccEEEEEEEcccccccEEEEEcccccEEEEEcccccEEEEEccccEEEEEEEccccEEEEEEcccccEEEEEEccccEEEEEEcccccEEEEEEEEccccccEEEEEEEEccccEEEEEcccccEEEEEEccccccEEEEEEEccccEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEcccccccEEEEEEcccccccEEEEcccEEEEEcccccEEEEEEcccccEEEEEEEcccccEEEEEcccccEEEEEEccccccEEEEEEcccccEEEEEEccccEEEEEEcccccEEEEEEccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEc //