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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08985.1
DDBJ      :             4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  736/915 : Eukaryota  25/199 : Viruses  0/175   --->[See Alignment]
c.1.21d.134.1
:430 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   30->371 3e59B PDBj 3e-32 15.0 %
:RPS:SCOP  58->276 1ad1A  c.1.21.1 * 1e-16 19.8 %
:RPS:SCOP  305->429 1aopA4  d.134.1.1 * 9e-08 12.9 %
:HMM:SCOP  304->414 1aopA4 d.134.1.1 * 7.3e-05 24.3 %
:RPS:PFM   31->380 PF04551 * GcpE 2e-66 46.8 %
:HMM:PFM   31->412 PF04551 * GcpE 3.8e-115 44.2 344/359  
:BLT:SWISS 8->425 ISPG_RALSO 0.0 85.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08985.1 GT:GENE ABF08985.1 GT:PRODUCT 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(2287670..2288962) GB:FROM 2287670 GB:TO 2288962 GB:DIRECTION - GB:PRODUCT 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase GB:PROTEIN_ID ABF08985.1 GB:DB_XREF GI:93354896 InterPro:IPR004588 LENGTH 430 SQ:AASEQ MNQNAFQPVIPGPLPRRVSRQASVVWGDNIVTIGGGAPVRVQSMTNTDTVDAIGTAIQIKELARAGSEIVRITVNTPEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLLHDYPECAQALSKYRINPGNVGKGAKRDKQFAEMIEMACRYNKPVRIGVNWGSLDQDLLARIMDENAQRAEPWPAQSVMVEALITSAIESAQKAEEIGLPANQIILSCKVSQVQELVAVYRELARRCDYALHLGLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGAPREKEVYVGQEILQTMGLRNFTPMVIACPGCGRTTSTTFQELAASIQSYLREQMPVWKTAYPGVEEMDVAVMGCIVNGPGESKHANIGISLPGSGESPAAPVFVDGVKVKTLRGENIAQEFQAIVDEYVRSHYGPDAKQASQEAVA GT:EXON 1|1-430:0| BL:SWS:NREP 1 BL:SWS:REP 8->425|ISPG_RALSO|0.0|85.9|418/431| RP:PDB:NREP 1 RP:PDB:REP 30->371|3e59B|3e-32|15.0|280/305| RP:PFM:NREP 1 RP:PFM:REP 31->380|PF04551|2e-66|46.8|314/353|GcpE| HM:PFM:NREP 1 HM:PFM:REP 31->412|PF04551|3.8e-115|44.2|344/359|GcpE| GO:PFM:NREP 3 GO:PFM GO:0016114|"GO:terpenoid biosynthetic process"|PF04551|IPR004588| GO:PFM GO:0046429|"GO:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity"|PF04551|IPR004588| GO:PFM GO:0055114|"GO:oxidation reduction"|PF04551|IPR004588| RP:SCP:NREP 2 RP:SCP:REP 58->276|1ad1A|1e-16|19.8|192/264|c.1.21.1| RP:SCP:REP 305->429|1aopA4|9e-08|12.9|116/145|d.134.1.1| HM:SCP:REP 304->414|1aopA4|7.3e-05|24.3|103/145|d.134.1.1|1/1|Sulfite reductase hemoprotein (SiRHP), domains 2 and 4| OP:NHOMO 788 OP:NHOMOORG 761 OP:PATTERN -------------------------------------------------------------------- 111121111111-111111-1111211111111111111111111111111111111111111111122111111111111111111111111111---------1111111111111111111111111111111-----111-11111111111111111111111111111111111111111111111111111111111111111111111111111-11-111--111-----------------------------------------------------------------------------------------1111111111111111111111111111111111111111111111111-111111111111111111111111111111111111-11111111111-11111111111111111111111111111111111111111111111111111---------------111111111111111111111111111111111111111111111111111111111111111111111111111211111-111111111111111111111111111--111111111111111111111111111111111111111111111111111111111111--11111--11111111111111111111-11111111111111111111111111111111111111111111111111111111111111111-111---------1111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111--------11------------1------1------1111111111111 11------1---------------------------------------------------------------------------------------------------3-------------------------------------------------1---------------11111F111113122-2111----1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 331 STR:RPRED 77.0 SQ:SECSTR ###############HHHHHHHHHHHHHHHHHHHHTTccccccHHHHHHHHHHHHHHHHHHHHHHTcEEcccccccccTTTcccccHHHHHHHHHHHHHHHTTcTTcEEEHHHHHHHHHHTccEEEccHHHHGGGGTccGTTccHHHHHHHHHHHHHHHHHTTcTTEEEEcGGGcGGGGGGTTcHHHHHHHHHHHHHcccHHHHHHHcccTTcHHHTTcHHHHHHHHHHHHHHHHTHHHHccTTccccHHHHHHHHHHHHHHHHHHHHHcTTcEEEEcccccTTHHHHccEEEccccTTccccccGGGcEEEEETTEEEEEcHHHHHHT#####################HTTTcEEEEETT####EEEEE########################################################### DISOP:02AL 1-9,418-431| PSIPRED ccccccccccccccccccEEEEEEEEEccEEEEcccccEEEEEccccccccHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHHHcccEEEccccccccHHHHHHHHHHHHHHHHccccEEEEcccccccHHHHHHHccccHHccccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEccHHHHHHHHHHHHHHccccEEEEEcccccccccEEHHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHHHHHHHccccccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEccccccHHccEEEEcccccccccccEEEccEEEEEEccHHHHHHHHHHHHHHHHHHHccHHHHccccccc //