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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08990.1
DDBJ      :             protein of unknown function UPF0005
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  463/915 : Eukaryota  75/199 : Viruses  0/175   --->[See Alignment]
:235 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   27->228 PF01027 * UPF0005 1e-18 39.8 %
:HMM:PFM   26->229 PF01027 * UPF0005 7.5e-58 41.8 196/203  
:BLT:SWISS 12->235 YCCA_ECOLI 3e-37 39.7 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08990.1 GT:GENE ABF08990.1 GT:PRODUCT protein of unknown function UPF0005 GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 2292802..2293509 GB:FROM 2292802 GB:TO 2293509 GB:DIRECTION + GB:PRODUCT protein of unknown function UPF0005 GB:PROTEIN_ID ABF08990.1 GB:DB_XREF GI:93354901 InterPro:IPR006214 LENGTH 235 SQ:AASEQ MNNKLNTYGFGNSAASVTDVAVRNRVLRNTYWLLAISMIPTVIGAWIGVVTGFTAMIAGSPMMSAVLFLAVAFGFMFAIEKTKNSGMGVVLLLAFTFFMGLMLARILSFTLSFSNGPALIMYAFGGTAAVFGVMATIASVSKRDFSGLAKFLFVGVILLILASLANIWLQLPALMITLSVIAIGIFSAFILVDVQRVVNGGETNYVTATLAIYLDVYNVFVNLLALLGIAGGSRD GT:EXON 1|1-235:0| BL:SWS:NREP 1 BL:SWS:REP 12->235|YCCA_ECOLI|3e-37|39.7|214/219| TM:NTM 7 TM:REGION 26->48| TM:REGION 52->74| TM:REGION 88->110| TM:REGION 118->140| TM:REGION 145->167| TM:REGION 174->196| TM:REGION 208->230| RP:PFM:NREP 1 RP:PFM:REP 27->228|PF01027|1e-18|39.8|196/200|UPF0005| HM:PFM:NREP 1 HM:PFM:REP 26->229|PF01027|7.5e-58|41.8|196/203|UPF0005| OP:NHOMO 637 OP:NHOMOORG 538 OP:PATTERN -------------------------------------------------------------------- ----1-------------------------------------------------------------------------------1---------------------------------------------1----1-----------------------------------------------111-----1-1--------------------1----------------------------------------------1121111--1-----111---1111111111111111111111111111111111111111----1---------------------------------------------1---1113--11--12121111-11111111111111-1121121111112112221222111----2-11-11111-------------111--11111111--1111111111111--1-11111111111112111111111111111111121111111111121111111111121111111111111111211---111111-11111111------11-1----11111111111111111111111121111--11111111111111111111111111--11111------22222222222222222-222222222222222222222222--122222222222121222222222221111111111111111------111111111111111111111111----------1111111111111111111111111111-11111111111111--------------111-------11111111----------------------------------------- 1-----1-1-----111-11------1------11111111111--11-11111---11111-1--------1-------------11----1-1----1-1-111-1-12212131----1--11-----------11-1------------------11-1212--511--21-12-------111-1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-1,14-19,232-236| PSIPRED cccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc //