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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF09058.1
DDBJ      :             periplasmic sensor signal transduction histidine kinase
Swiss-Prot:             

Homologs  Archaea  27/68 : Bacteria  844/915 : Eukaryota  107/199 : Viruses  1/175   --->[See Alignment]
a.30.2d.110.3d.122.1
:450 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   204->429 3dgeA PDBj 4e-24 31.8 %
:RPS:PDB   79->447 2bu8A PDBj 7e-33 11.1 %
:RPS:SCOP  92->198 1d06A  d.110.3.2 * 1e-05 15.9 %
:RPS:SCOP  189->271 2c2aA1  a.30.2.1 * 2e-12 25.3 %
:RPS:SCOP  274->437 1bxdA  d.122.1.3 * 3e-24 22.9 %
:HMM:SCOP  83->198 1ew0A_ d.110.3.2 * 7.9e-07 18.1 %
:HMM:SCOP  188->272 2c2aA1 a.30.2.1 * 5e-19 32.9 %
:HMM:SCOP  261->426 1jm6A2 d.122.1.4 * 1.7e-45 38.6 %
:RPS:PFM   49->87 PF11808 * DUF3329 5e-06 48.7 %
:RPS:PFM   212->271 PF00512 * HisKA 2e-05 35.0 %
:RPS:PFM   321->426 PF02518 * HATPase_c 7e-21 43.4 %
:HMM:PFM   318->426 PF02518 * HATPase_c 1.4e-31 38.0 108/111  
:HMM:PFM   206->271 PF00512 * HisKA 7.6e-22 33.3 66/68  
:HMM:PFM   4->89 PF11808 * DUF3329 7.7e-10 31.0 84/90  
:HMM:PFM   102->156 PF00989 * PAS 3.6e-06 18.9 53/113  
:HMM:PFM   277->312 PF05589 * DUF768 0.00042 25.0 36/64  
:BLT:SWISS 66->425 PHOR_ECOLI 8e-73 40.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF09058.1 GT:GENE ABF09058.1 GT:PRODUCT periplasmic sensor signal transduction histidine kinase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(2386671..2388023) GB:FROM 2386671 GB:TO 2388023 GB:DIRECTION - GB:PRODUCT periplasmic sensor signal transduction histidine kinase GB:PROTEIN_ID ABF09058.1 GB:DB_XREF GI:93354969 InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR005467 InterPro:IPR008358 LENGTH 450 SQ:AASEQ MNVIWARSVAILVSLTVVATGLYVFAGPVSGLLFLCIALFLLLGYYLFQINRLWKVLDAPAYGEIPSALGLWGEVYYRLHRLVKRWRTQVLQVEQQHTRFIQAIQASPYGVLMLDDADQIEWCNDVAEQHFGLNAKRDVRQRITHLIRRPEFVHYLTRERYDEPLIMRDMGEHKRSSTSVQILPYGENRKLVLTQDITKVENTEAMRRDFVANVSHELKTPLTVLTGFLETVRDLPVSEEDRKRYIDMMLVQSMRMQHIVEDLLALAKLESDVQPPTLDPVDVGGLAAHLVHDAEALSQGRHDIHAEIDTAVVLRGSEGELLSALGNLVSNAVRYTPDGGRIAIRMTYTDGHSVFSVSDTGLGIAPEHIPRLTERFYRVDRSRSRDTGGTGLGLAIVKHVLSRHHADLRVTSEVGRGSTFRIVFPVDRSGYEPESAQPMPQLGDAPRHAA GT:EXON 1|1-450:0| BL:SWS:NREP 1 BL:SWS:REP 66->425|PHOR_ECOLI|8e-73|40.2|356/431| TM:NTM 2 TM:REGION 1->23| TM:REGION 27->49| SEG 31->48|gllflcialflllgyylf| BL:PDB:NREP 1 BL:PDB:REP 204->429|3dgeA|4e-24|31.8|223/237| RP:PDB:NREP 1 RP:PDB:REP 79->447|2bu8A|7e-33|11.1|333/359| RP:PFM:NREP 3 RP:PFM:REP 49->87|PF11808|5e-06|48.7|39/89|DUF3329| RP:PFM:REP 212->271|PF00512|2e-05|35.0|60/69|HisKA| RP:PFM:REP 321->426|PF02518|7e-21|43.4|106/112|HATPase_c| HM:PFM:NREP 5 HM:PFM:REP 318->426|PF02518|1.4e-31|38.0|108/111|HATPase_c| HM:PFM:REP 206->271|PF00512|7.6e-22|33.3|66/68|HisKA| HM:PFM:REP 4->89|PF11808|7.7e-10|31.0|84/90|DUF3329| HM:PFM:REP 102->156|PF00989|3.6e-06|18.9|53/113|PAS| HM:PFM:REP 277->312|PF05589|0.00042|25.0|36/64|DUF768| GO:PFM:NREP 4 GO:PFM GO:0000155|"GO:two-component sensor activity"|PF00512|IPR003661| GO:PFM GO:0007165|"GO:signal transduction"|PF00512|IPR003661| GO:PFM GO:0016020|"GO:membrane"|PF00512|IPR003661| GO:PFM GO:0005524|"GO:ATP binding"|PF02518|IPR003594| RP:SCP:NREP 3 RP:SCP:REP 92->198|1d06A|1e-05|15.9|107/130|d.110.3.2| RP:SCP:REP 189->271|2c2aA1|2e-12|25.3|83/89|a.30.2.1| RP:SCP:REP 274->437|1bxdA|3e-24|22.9|157/161|d.122.1.3| HM:SCP:REP 83->198|1ew0A_|7.9e-07|18.1|116/130|d.110.3.2|1/1|PYP-like sensor domain (PAS domain)| HM:SCP:REP 188->272|2c2aA1|5e-19|32.9|85/0|a.30.2.1|1/1|Homodimeric domain of signal transducing histidine kinase| HM:SCP:REP 261->426|1jm6A2|1.7e-45|38.6|166/190|d.122.1.4|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 14270 OP:NHOMOORG 979 OP:PATTERN -----------------------2I5542737--11-12222439-2A7MG49--------------3 HZq5M46677754468966-6G44A9666668HDEF7ABA7DEG956457748AC45611B9S3M5DIDI6444475554I8822443dcwa-i113--B7X8CDvXrZk--------------2443A54593E5jhdZZH79t3*XpwWWGGHAB233555NWDZ***I332332242322QEB44344FFIWWYVZZZZKbZcfeWIJIHGFadjCGGR7NI988A8Apl69989888889998877876967499445466655A9655575686ABA766654477777777777555555555655553344233376aLMySSRVVVVTROEWVUAFHCPMK63CEIJ6cZRLF845857685226UEQgXXP56666HEdUWGBCPQPRTCCCBBBB9CCG-YVcSXZecHKO4NNNTPNMRTRJGDNFCNF9CGFHGAMB4444444489867*RO2221122211221122112112112---124FI76BEDBFaRTTYYUHIIDWVcfMMMNCMbcfQYXd25QVIcLMBCaaROQ5EMSBDCBQB222222277GGX*UqZKGAoK9*cRPR3*y*vx**LUifzh**CS323221111-2-1--1111-9844G55LG9aPRQ8XPEGBEGEHKHJFFGKJINIOO--299ED------IGFDFECIHHJIIJJHI-HKJHIIIHHIHHIGHIHHGJKKCDAA9HFFHGIHGGHIIIIHJJGECGFHI6-GFFGHHHDFHHH--39777777787AIp9Q444233132233113EEDEF7C574IKXXcXTmciUYZcVVYZb31-2122-1BJKKIKLLLLOPOTUVVSSSSSLOO8878--*2QQ9AFF-111-1113-2-------------------------4A554454445y4 --1-79-------1C45653675857533333333334443344445755664955444667231----3--121------2222221-2525352333265377D-7-5------------------------------------------------5----3---------1--343I1-1-2N-1951B2-B2432 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1- STR:NPRED 393 STR:RPRED 87.3 SQ:SECSTR #########################################################TccccTTcEEcGGGccHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHTTccHHHHTcHHHHHHHHHHHHHHHHHHTTccccTTcTTTTHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccTTcccccccccTTcEEEEEHHHHHHHHHHHHHHHHHHHHcccccEEEEEEHHHHHHcccccEEEEEEEcccTTcccEEEEcHHHHHHHHHHHHHHHHHHHHHTTTTccccEEcccEEEEEEEEEEEcccHHHHGGGGcTTTTccccccccccccccHHHHHHHHHHHTTcEEEEEEETTEEEEEEEEEEccTTTcccccccccHHHHTTccccc DISOP:02AL 1-1,88-96,383-383,428-451| PSIPRED ccEEEEHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccEEEEcHHHHHHHcccHHHHccccHHHHHccHHHHHHHHcccccccEEEEEccccEEEEEEEEEEEccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHHHHHcccEEEEEcccccEEEEcHHHHHHHHHHHHHccEEEcccccEEEEEEEEEccEEEEEEEEccccccHHHHHHHccccEEccccccccccccccHHHHHHHHHHHcccEEEEEEEccccEEEEEEEEccccccccccccccccccccccccc //