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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF09108.1
DDBJ      :             extracellular solute-binding protein, family 1
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  81/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.94.1
:580 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   114->520 1eu8A PDBj 1e-11 32.2 %
:RPS:PDB   86->528 3d4gE PDBj 6e-22 15.3 %
:RPS:SCOP  58->576 1j1nA  c.94.1.1 * 2e-34 11.5 %
:HMM:SCOP  19->522 1y3nA1 c.94.1.1 * 1e-62 26.5 %
:RPS:PFM   85->205 PF01547 * SBP_bac_1 1e-09 35.4 %
:HMM:PFM   88->428 PF01547 * SBP_bac_1 6e-14 23.8 277/314  
:BLT:SWISS 85->163 MUDD_CHLTR 4e-04 32.5 %
:BLT:SWISS 310->522 Y4OP_RHISN 7e-04 27.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF09108.1 GT:GENE ABF09108.1 GT:PRODUCT extracellular solute-binding protein, family 1 GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(2444305..2446047) GB:FROM 2444305 GB:TO 2446047 GB:DIRECTION - GB:PRODUCT extracellular solute-binding protein, family 1 GB:PROTEIN_ID ABF09108.1 GB:DB_XREF GI:93355019 InterPro:IPR006059 LENGTH 580 SQ:AASEQ MKERVKLGMSALAFAAALACGHAAWADEASAKKWVDNEFQPSSLSKDKQMAEMKWFMDAAAKLKAKGVTQINVVSETITTHEYESKTLAKAFEEITGIKVNHDIIQEGDVVEKLQTSMQSGKSIYDGWISDSDLIGTHYRYGAILPLSDYMTGVGKEYTNPGIDIKDFIGTKFTTAPDGKLYQLPDQQFANLYWFRADWFARKDLQEKFKAKYGYDLGVPTNWSAYEDIANFFTNDVKELDGKKVFGHMDYGKKDPSLGWRFTDAWLSMAGSADKGLPNGMPVDEWGIRVAEDKCTPVGASVSRGGATNSPAAVYALTKYIDWMKKYAPPQAMGMTFSEAGPVPAQGQVAQQIFWYTAFTADMTKKGLPVVNADGSPKWRMAPSPYGPYWKQGMQNGYQDVGSWTFFKNTDPNRLAAAWLYAQFVTSKTVSLKKSLTGLTFIRDSDIHHEYLTKNADKYGGLIEFYRSPARVAWTPTGNNVPDYPKLAQLWWKNVATAVTGEKTPQVAMDTLAEEMDNVMGRLQRAGMANCAPKLNPKSDPSKWLSSEHAPWKKLDNEKPKGETIAYDKLLQAWKEGRVR GT:EXON 1|1-580:0| BL:SWS:NREP 2 BL:SWS:REP 85->163|MUDD_CHLTR|4e-04|32.5|77/803| BL:SWS:REP 310->522|Y4OP_RHISN|7e-04|27.4|186/100| SEG 11->26|alafaaalacghaawa| BL:PDB:NREP 1 BL:PDB:REP 114->520|1eu8A|1e-11|32.2|329/407| RP:PDB:NREP 1 RP:PDB:REP 86->528|3d4gE|6e-22|15.3|359/472| RP:PFM:NREP 1 RP:PFM:REP 85->205|PF01547|1e-09|35.4|113/282|SBP_bac_1| HM:PFM:NREP 1 HM:PFM:REP 88->428|PF01547|6e-14|23.8|277/314|SBP_bac_1| GO:PFM:NREP 2 GO:PFM GO:0005215|"GO:transporter activity"|PF01547|IPR006059| GO:PFM GO:0006810|"GO:transport"|PF01547|IPR006059| RP:SCP:NREP 1 RP:SCP:REP 58->576|1j1nA|2e-34|11.5|478/492|c.94.1.1| HM:SCP:REP 19->522|1y3nA1|1e-62|26.5|422/0|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 121 OP:NHOMOORG 83 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------1-1------------1----------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------221---11111----------1---1-----13--211253366332-----1111212111---------------------------------------------1------1111-------------22---------1111--111--1111-2111------------------------1--11--------------------------------------------------------------1-------1---------1----------------------------------------------------------------------------------------------------------------411---------------------------------1111111-111-------------------------------------------------------------------------------------11---------- --------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------2---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 543 STR:RPRED 93.6 SQ:SECSTR ###############################HHHTTcccccccTTcEEEEccccccTccccEEccccTTcEEEEEcTTccHHHHcHHHHHHHHHHHccEEEEEccTTHHTHHHHHHHHHHTTccccEEEEEGGGHHHHHHTTccccccccHHHHTTccHHHHHHHHHccHHHHHHTETTEEccEEEEEEccEEEEETTTcccccHHHHHHHGGGcEEEcccccTTHHHHHHHHHHTTcHTTTTTTccccEEEccccccHHHHHHHHHHTTcEEEEEETTEEEEEEEEcHHHHHHHTccccEEEEccEcccHHHHHHHHHHHHHHHTTcccTTccHHHHHHHHHHHTTcEEEEEEcGGGHHHHHHHHTTTTcccHHHccEEEEcccccTTcccccEEEEEEEEEEEEcTTcTccHHHHHHHHHHTTccHHHHHHHHHHccccEEccHHHHHHHTTcHHHHTTcHHHHHHHHHHHHcEEccccTTHHHHHHHHHHHHHHHHHTcccHHHHHHHHHHHHHHEEEEEcccEEcccGGGEETTTTEEcTHTccccccEccEEEcTTTcGGGHHHHHHHH###### DISOP:02AL 1-6,555-555,578-581| PSIPRED ccHHHHHHHHHHHHHHHHHHccHHcccHHHHHHHHHHccccccccHHHHHHccHHHHHHHHHcccccccEEEEEEEcccHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHcccccccEEEEccHHHHHHHHccccccccHHHcccccccccccccHHHHHHHHHccccccEEEEEEEccccEEEEEEHHHHccccccHHHHHHccccccccccHHHHHHHHHHHHHHHHcccccccEEEEEccccccccHHHHHHHHHHHcccccHHHHcccHHHHcccEEEcccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHcccEEEEEEcHHHHcccccccccccccccccccEEEEEccccccccccccccEEccEEEEEEEccccccHHHHHHHHHHHccHHHHHHHHHcccccccHHHHccHHHHHcccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHcccccccHHHcccccccccccHHHHHHHHHHcccc //