[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Ralstonia metallidurans CH34 (rmet0)
Gene : ABF09125.1
DDBJ      :             OmpA/MotB
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  455/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
d.79.7
:167 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   42->165 2k1sA PDBj 3e-17 35.5 %
:RPS:PDB   58->165 3cypB PDBj 6e-26 24.1 %
:RPS:SCOP  58->163 1oapA  d.79.7.1 * 3e-26 29.2 %
:HMM:SCOP  49->164 1r1mA_ d.79.7.1 * 1.1e-32 44.0 %
:RPS:PFM   63->154 PF00691 * OmpA 8e-12 40.2 %
:HMM:PFM   63->158 PF00691 * OmpA 6.6e-22 37.9 95/97  
:BLT:SWISS 25->165 YFIB_ECOLI 3e-28 42.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF09125.1 GT:GENE ABF09125.1 GT:PRODUCT OmpA/MotB GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 2460246..2460749 GB:FROM 2460246 GB:TO 2460749 GB:DIRECTION + GB:PRODUCT OmpA/MotB GB:PROTEIN_ID ABF09125.1 GB:DB_XREF GI:93355036 InterPro:IPR001035 InterPro:IPR006664 InterPro:IPR006665 LENGTH 167 SQ:AASEQ MRAPSRPRRAFLLTTLAGLGALALSGCASPAHKLTPAQIAVLKNQGFMLTGNGWELVMPDKVLFGFDDDTVSAEQQNALARVARTLRDAGIDALRVDGHTDNVGTIEYNQQLSMRRAEAVARVLLTCGFARDHLDVRGFGKTRPIADNGTALGRAENRRVAIIVTVE GT:EXON 1|1-167:0| BL:SWS:NREP 1 BL:SWS:REP 25->165|YFIB_ECOLI|3e-28|42.6|141/160| SEG 12->24|llttlaglgalal| BL:PDB:NREP 1 BL:PDB:REP 42->165|2k1sA|3e-17|35.5|124/149| RP:PDB:NREP 1 RP:PDB:REP 58->165|3cypB|6e-26|24.1|108/129| RP:PFM:NREP 1 RP:PFM:REP 63->154|PF00691|8e-12|40.2|92/97|OmpA| HM:PFM:NREP 1 HM:PFM:REP 63->158|PF00691|6.6e-22|37.9|95/97|OmpA| GO:PFM:NREP 1 GO:PFM GO:0009279|"GO:cell outer membrane"|PF00691|IPR006665| RP:SCP:NREP 1 RP:SCP:REP 58->163|1oapA|3e-26|29.2|106/108|d.79.7.1| HM:SCP:REP 49->164|1r1mA_|1.1e-32|44.0|116/140|d.79.7.1|1/1|OmpA-like| OP:NHOMO 1303 OP:NHOMOORG 458 OP:PATTERN -------------------------------------------------------------------- 315--------------11-1---1-111111---------2-1---1-------------------11-1------------1-111111--4111--153343694171--------------21235211212-----------------12----1------2-----1-----1-----------4---------------------------------1--------------------------------------------------------------------------------------------------11-12-------1-1-111-----------------1-----1---1-6211-13321-11-212322212112211111111112---1--1-1111-311321221232-12425354344436--------2---1342-----------------------------1-142134433B5557723333554533332554344422223222433434541221532313221111111123323421252-33111-6574855432262EI4122211222222-1--------12----33-145122235211123433343442424--33625------22--22-2222222222-22222222232222222214441-1-11312221221222222321122221-343334444433---4-----333314833----3---------15556545434568888A89ABAAAA8666----------767544444A943344232332221111--11332222--------1-------------------------------------1-1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----1-----2---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 141 STR:RPRED 84.4 SQ:SECSTR ##########################TEEEEEEEEEEEccTccTcccEEccEEEETTcccEEcccTTcccccHHHHHHHHHHHHHHTTccTTcEEEEEEcccccccccHHHHHHHHHHHHHHHHHHTTccGGGEEEEEcTTccccccTTcHHHHHHHcEEEEEEETG DISOP:02AL 1-6,8-8,29-46| PSIPRED cccccccHHHHHHHHHHHHHHHHHcccccHHHHccHHHHHHcccccEEEEcccEEEEEcccEEcccccccccHHHHHHHHHHHHHHHHcccEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHccccHHHEEEEEccccccccccccHHHHHcccEEEEEEEEc //