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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF09130.1
DDBJ      :             glycoside hydrolase, family 8
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  130/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.102.1
:387 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   34->140 1wzzA PDBj 5e-06 38.9 %
:RPS:PDB   23->369 2drqA PDBj 8e-55 16.2 %
:RPS:SCOP  26->358 1wzzA1  a.102.1.2 * 1e-59 27.2 %
:HMM:SCOP  4->372 1wu4A1 a.102.1.2 * 7.1e-112 40.1 %
:RPS:PFM   23->325 PF01270 * Glyco_hydro_8 1e-46 43.2 %
:HMM:PFM   12->361 PF01270 * Glyco_hydro_8 1.4e-65 31.6 329/342  
:BLT:SWISS 24->383 GUN_ECO57 3e-78 43.2 %
:PROS 124->142|PS00812|GLYCOSYL_HYDROL_F8
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF09130.1 GT:GENE ABF09130.1 GT:PRODUCT glycoside hydrolase, family 8 GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 2467411..2468574 GB:FROM 2467411 GB:TO 2468574 GB:DIRECTION + GB:PRODUCT glycoside hydrolase, family 8 GB:PROTEIN_ID ABF09130.1 GB:DB_XREF GI:93355041 InterPro:IPR002037 LENGTH 387 SQ:AASEQ MRRAMAWLLRATVVCTLAGTVLTSAAATCAWPDWDAFRRSTISQDGRVIDDSTDQQVTVSEGQSYALFFALVANDRATFDKLLTWTENNLAQGDLTAHLPAWIWGKRTEGEHAGTWGVIDANPASDADLWIAYSLLEAGRLWNERRFTALGTLLARRALREETAVLPGLGRTLLPGPTGFHTSPDVWRLNPSYVPLQVMRRLAAMPGEDSSWKTLVDTSARLILNTAPHGFSPDWVEYHKGRGFRPDTQTQAGGSYNAIRVYLWAGMMAPRDPLRTSVLQAFRPMADYVRKQGDPPERVDTQSGTFGPNSGNGGFSAAVAPYLAALGQTDDARAQAQRARDLAAQKPAGYYSQVLALFGLGHLDGHFRFEADGTLVPAWKSTCPATR GT:EXON 1|1-387:0| BL:SWS:NREP 1 BL:SWS:REP 24->383|GUN_ECO57|3e-78|43.2|347/368| PROS 124->142|PS00812|GLYCOSYL_HYDROL_F8|PDOC00640| SEG 145->164|rrftalgtllarralreeta| SEG 166->179|lpglgrtllpgptg| SEG 330->345|ddaraqaqrardlaaq| BL:PDB:NREP 1 BL:PDB:REP 34->140|1wzzA|5e-06|38.9|95/309| RP:PDB:NREP 1 RP:PDB:REP 23->369|2drqA|8e-55|16.2|334/377| RP:PFM:NREP 1 RP:PFM:REP 23->325|PF01270|1e-46|43.2|292/332|Glyco_hydro_8| HM:PFM:NREP 1 HM:PFM:REP 12->361|PF01270|1.4e-65|31.6|329/342|Glyco_hydro_8| GO:PFM:NREP 2 GO:PFM GO:0004553|"GO:hydrolase activity, hydrolyzing O-glycosyl compounds"|PF01270|IPR002037| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF01270|IPR002037| RP:SCP:NREP 1 RP:SCP:REP 26->358|1wzzA1|1e-59|27.2|302/319|a.102.1.2| HM:SCP:REP 4->372|1wu4A1|7.1e-112|40.1|354/0|a.102.1.2|1/1|Six-hairpin glycosidases| OP:NHOMO 137 OP:NHOMOORG 130 OP:PATTERN -------------------------------------------------------------------- 1----------------------------------------------------------------------------------1--1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------21111112----1-----1---1------------------------1-----------------------------------------11----1111111111-11121111-111111-1-1---1----------------11----------------------------------------------------------------------------1-----1---------------------------------1111111111111111--111111111111111111122211--1111111111111111-111--111--1-1-111-1111-------------------------------------------1--------1-111--1-------------112------------1-1-------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 354 STR:RPRED 91.5 SQ:SECSTR ###############cHHHHHHHHHHHHHHHHHHHccEEEETTTEEEEccTTTTTTcEEHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHTccccTcTTTTccccEEcTTccccccEccccccccHHHHHHHHHHHHHHHHHHcccccTTccHHHHHHHHHHHHHccccccccccTTTccccccTTccEEcGGGccHHHHHHHHHHccGGGHHHHHHHHHHHHHHHHcTTccccccEETccTTcccccTTccccccGGGGHHHHHHHHHHcccHHHHHHHHHHHHHHTTccGGGcEEEcTTcccEEEEEcccHHHHHHHHHHGGGGcTTcTTHHHHHHHHHTcccccTTHHHHHHHHHHHHHHHTTcccc################## DISOP:02AL 1-1,3-3,5-6,328-341,384-388| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccccEEcccccccEEEcHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccccccEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccEEEEEcccccccccccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccEEEEccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccEEEccccEEEEcccccccccc //