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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF09228.1
DDBJ      :             putative secreted protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  55/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:472 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   65->140 2c5kT PDBj 2e-06 15.8 %
:RPS:PFM   342->448 PF03743 * TrbI 2e-08 35.6 %
:HMM:PFM   60->109 PF06005 * DUF904 0.00018 26.0 50/72  
:HMM:PFM   85->134 PF02601 * Exonuc_VII_L 0.00054 22.0 50/319  
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF09228.1 GT:GENE ABF09228.1 GT:PRODUCT putative secreted protein GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 2562391..2563809 GB:FROM 2562391 GB:TO 2563809 GB:DIRECTION + GB:PRODUCT putative secreted protein GB:PROTEIN_ID ABF09228.1 GB:DB_XREF GI:93355139 LENGTH 472 SQ:AASEQ MRSNGLLKWLMIPVAILVLFVGIRLFSGGGSTAPPAADNGAQLTPEEMKALGIEGDTPRDTVATLVAQVKQLRTELQTALSDNKSQREENQRLRQRENSIDQRINSALESERSNLRRDQEQAASARQQTEGLLADLQRRLDSIGGRGGGHADLPVGLGLQGGDEAGMEGGVRWVEPDDAKPAEGRNGGRGASGGMSFPTSFGPAQSTLETTAETVANAGARASGVKSAKPVYTVPTNSTLMGSVAMTALIGRVPIDGTVNDPYPFKVLVGPDNLTANGIDIPDVAGAVFSGTASGDWTLSCVRGQVRSITFVFNDGTIRTIPEDREGNQQNNQQRDGLGWISDPHGIPCVSGERRSNAQQYLGSQALITAAGAGVASLIESDSGRMSYVGSDGSIGTVGITGQEAVGQILAGGVRDMSAWVNKLYGQAFAAVYVQPGAKVAVHLEKPLAIDFDPEGRKVDHRAGESHALELD GT:EXON 1|1-472:0| COIL:NAA 51 COIL:NSEG 2 COIL:REGION 82->92| COIL:REGION 106->145| TM:NTM 1 TM:REGION 5->27| SEG 86->98|qreenqrlrqren| SEG 184->194|grnggrgasgg| RP:PDB:NREP 1 RP:PDB:REP 65->140|2c5kT|2e-06|15.8|76/89| RP:PFM:NREP 1 RP:PFM:REP 342->448|PF03743|2e-08|35.6|101/192|TrbI| HM:PFM:NREP 2 HM:PFM:REP 60->109|PF06005|0.00018|26.0|50/72|DUF904| HM:PFM:REP 85->134|PF02601|0.00054|22.0|50/319|Exonuc_VII_L| OP:NHOMO 67 OP:NHOMOORG 56 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------4-----------------------1---1--1---12311-----1----------------1-2---------------------------------------------------------------1-1----------------------------1--1---------11-------------------1--------------11--1111--------11-1--3---------1--------1-----------1212-----------11----11-----------1--111-111---11-1-1--------------------------1-111------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 76 STR:RPRED 16.1 SQ:SECSTR ################################################################HHHHHHHHHHHTccccTTHHHHHHHHHHHHHHHHHHHHHHHHHHTcTTcccHHHHHHHHHHHHHHHHHHHHHHTcc############################################################################################################################################################################################################################################################################################################################################ DISOP:02AL 1-2,25-45,82-99,126-127,132-134,137-147,182-190,204-228,321-337,464-473| PSIPRED ccccccHHHHHHHHHHHHHHHHHEccccccccccccccccccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccccEEEEEcccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccHHHHHHHHHHEEEcccccEEcccccEEEEEcHHHHccccccccccccEEEEEEEEccEEEEEEEEEEEEEEEEEEccEEEEcccccccccccccccccEEEEEcccccccccccEEccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccccEEEEEEEccccccccccccEEEcccccccccccc //