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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF09241.1
DDBJ      :             Relaxase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  58/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.211.1a.4.5b.29.1
:680 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   544->647 2ipqX PDBj 2e-05 34.4 %
:RPS:PDB   73->208 2dqbC PDBj 2e-05 18.4 %
:RPS:SCOP  100->217 2hekA1  a.211.1.1 * 7e-13 16.5 %
:RPS:SCOP  362->432 1ajkA  b.29.1.2 * 9e-04 14.5 %
:RPS:SCOP  544->666 2ipqX1  a.4.5.74 * 2e-46 27.3 %
:HMM:SCOP  92->193 2hekA1 a.211.1.1 * 5.4e-05 23.0 %
:RPS:PFM   81->383 PF07514 * TraI_2 3e-84 60.8 %
:RPS:PFM   560->664 PF07515 * DUF1528 7e-39 69.7 %
:HMM:PFM   77->390 PF07514 * TraI_2 3.3e-123 54.3 313/327  
:HMM:PFM   560->665 PF07515 * DUF1528 4.1e-41 52.9 104/106  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF09241.1 GT:GENE ABF09241.1 GT:PRODUCT Relaxase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 2575344..2577386 GB:FROM 2575344 GB:TO 2577386 GB:DIRECTION + GB:PRODUCT Relaxase GB:PROTEIN_ID ABF09241.1 GB:DB_XREF GI:93355152 InterPro:IPR011093 InterPro:IPR011119 LENGTH 680 SQ:AASEQ MTLESHPVPRYTETVKGQRAEMARERGARGKALPRKGQKASRSARHQDTHMLSLFQRKRPAVATAPTPPPASDLPKGLMRPESAASLLATPRRQKLLEHIWQRTSLSRKQFAVLYRAPLERYAELVQAFPASESHHHAYPGGMLDHGLEIVAYALKLRQSHLLPIGASPEDQAAQAEAWTAAVAYAALLHDIGKIAVDLHVELADGSLWHPWYGPLHQPYRFRYRDDREYRLHSAATGLLYRQLLDTQLLDWLSDYRDLWGPLLYVLAGQYEHAGVLGELVVQADRASVAQELGGDPARAMAAPKHALQRKLLDGLRYLLKEELKLNQPEASDGWLTEDALWLVSKTVSDKLRAHLLSQGIDGIPANNTAVFNVLQDHGMLQPTLDGKAVWRATVTSNAGWTHSFTLLRLAPALIWEAGERPAPFAGTVAIDTSPVEKHAAAASSPEVAAKPTPGGQESPPWEGGSAADPIIAPLAEAMPDVMEDLLTMVGMGDSSATQQDESTIPTELSATRPEAPPPSIVASSPSSPAPAATPAATTVQPSGEHFMAWLKQGIASRRLIINDAKALVHTVSDTAYLVSPGVFQRYAQEHPQLAAIARQEKLEPWQWAQKRFEKLAAHRKQASGLNIWTCHVSGPRKSRQLHGYLLTQPGALFERVPPNNPYLCLFNEEAGREVSLAAK GT:EXON 1|1-680:0| SEG 19->32|raemarergargka| SEG 60->71|pavataptpppa| SEG 173->187|aaqaeawtaavayaa| SEG 220->231|yrfryrddreyr| SEG 239->251|llyrqlldtqlld| SEG 440->450|aaaasspevaa| SEG 516->543|apppsivasspsspapaatpaattvqps| BL:PDB:NREP 1 BL:PDB:REP 544->647|2ipqX|2e-05|34.4|90/119| RP:PDB:NREP 1 RP:PDB:REP 73->208|2dqbC|2e-05|18.4|114/360| RP:PFM:NREP 2 RP:PFM:REP 81->383|PF07514|3e-84|60.8|301/318|TraI_2| RP:PFM:REP 560->664|PF07515|7e-39|69.7|99/101|DUF1528| HM:PFM:NREP 2 HM:PFM:REP 77->390|PF07514|3.3e-123|54.3|313/327|TraI_2| HM:PFM:REP 560->665|PF07515|4.1e-41|52.9|104/106|DUF1528| RP:SCP:NREP 3 RP:SCP:REP 100->217|2hekA1|7e-13|16.5|97/369|a.211.1.1| RP:SCP:REP 362->432|1ajkA|9e-04|14.5|69/212|b.29.1.2| RP:SCP:REP 544->666|2ipqX1|2e-46|27.3|110/121|a.4.5.74| HM:SCP:REP 92->193|2hekA1|5.4e-05|23.0|87/0|a.211.1.1|1/1|HD-domain/PDEase-like| OP:NHOMO 78 OP:NHOMOORG 58 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------4---1-------------------1---1--1---113-1-----1---------1------1-3--------------------------------------------------------------11-1-------1-----------------------1------2--1-----------1-----------1---------1-1---2111--------11-1--3---------2--------1------------------------1-31----1------------2--221-111---111112--------------------------11221---1-------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 226 STR:RPRED 33.2 SQ:SECSTR ########################################################################HHHHHHccTTcccGGGccccccccccccc#ccHHHHHHHHHHHcHHHHHGGGcccccccccccccHHcccHHHHHHHHHHHHHHHHHHH###TTccHHHHHHHH#####HHHHHHHHTTTTcccccHHHHHHHHHHHTTTTcccH######################################################################################################################################################################################################################################################################################################################################HHHHHHHHHHHHHTTccccccTTccEEEETTEEEEETTHHHHHHHHHc######cHHHHH######HHHHHT#ccccccTT#cccEEEETTTEEEEEEEEEEEE################################# DISOP:02AL 1-6,18-48,63-65,68-71,297-299,437-479,490-533,674-681| PSIPRED ccccccccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHcccccHHHHHccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEccccccccccccccccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccHHHHcccccccHHHHHHHHHHHHHHccccccccccccEEEcccEEEEEEcccHHHHHHHHHHccccccccccHHHHHHHHHccEEEEcccccEEEEEEEEccccccccEEEEcccHHHHcccccccccccccEEcccccccHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccEEcccccccccccccccccccccHHHHHHHHHHHHHcccEEEEcccccEEEEccEEEEEcHHHHHHHHHHcHHcccccccHHcccccHHHHHHHHHcccccccccEEEEEEEEEcccccccEEEEEEcccHHHccccccccccEEEEccccccHHHHccc //