[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Ralstonia metallidurans CH34 (rmet0)
Gene : ABF09245.1
DDBJ      :             Alkylhydroperoxidase AhpD core
Swiss-Prot:             

Homologs  Archaea  11/68 : Bacteria  147/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.152.1
:125 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   28->110 1vkeF PDBj 1e-11 37.3 %
:RPS:PDB   6->108 2cwqC PDBj 2e-15 23.5 %
:RPS:SCOP  36->108 2cwqA1  a.152.1.4 * 2e-19 27.4 %
:HMM:SCOP  4->118 1p8cF_ a.152.1.2 * 3.7e-26 36.5 %
:RPS:PFM   28->106 PF02627 * CMD 1e-05 39.2 %
:HMM:PFM   24->106 PF02627 * CMD 5.3e-25 38.6 83/85  
:BLT:SWISS 1->113 Y4147_RALEH 1e-18 39.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF09245.1 GT:GENE ABF09245.1 GT:PRODUCT Alkylhydroperoxidase AhpD core GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(2580177..2580554) GB:FROM 2580177 GB:TO 2580554 GB:DIRECTION - GB:PRODUCT Alkylhydroperoxidase AhpD core GB:PROTEIN_ID ABF09245.1 GB:DB_XREF GI:93355156 InterPro:IPR003779 InterPro:IPR004675 LENGTH 125 SQ:AASEQ MTTSYRQLTQDVVAHLAPLHKGVPQVMKSFGEMGKAAIADGALDAKTKELIALAIGVAARCDGCIGFHAKALVKLGATAAEVHEALGVAIYMGGGPSAMYASNAVAAFNEFAALSSIPGAPASAP GT:EXON 1|1-125:0| BL:SWS:NREP 1 BL:SWS:REP 1->113|Y4147_RALEH|1e-18|39.8|113/113| BL:PDB:NREP 1 BL:PDB:REP 28->110|1vkeF|1e-11|37.3|83/97| RP:PDB:NREP 1 RP:PDB:REP 6->108|2cwqC|2e-15|23.5|102/109| RP:PFM:NREP 1 RP:PFM:REP 28->106|PF02627|1e-05|39.2|79/83|CMD| HM:PFM:NREP 1 HM:PFM:REP 24->106|PF02627|5.3e-25|38.6|83/85|CMD| RP:SCP:NREP 1 RP:SCP:REP 36->108|2cwqA1|2e-19|27.4|73/117|a.152.1.4| HM:SCP:REP 4->118|1p8cF_|3.7e-26|36.5|115/115|a.152.1.2|1/1|AhpD-like| OP:NHOMO 197 OP:NHOMOORG 159 OP:PATTERN --1-1------------------------1------------------1-234------1-111---- -2----------------------1------11-----21--1-------------------2--------------------------------------1111----------------------------------------1-------------------1--------------------------------------------------------1-------------------------------------1---------1------------------------------------------------------1--1111121111-1----------1------------1----1-1-----1--------1212121-11111-----------------1-21-------------1--1---1-31111--2--------111-11--------------------------------------111-423122-1111111-1111121321112--11--1-21--12---11--1-12----------1-----------1--------------------------------------------111111-11----1-------------------------11---------------------------------------------------2-----------------------------------------1-----1111----1111-1-----------------1----11111----111--1--------------------------11-----------------------------------------------------------11--22112--- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 106 STR:RPRED 84.8 SQ:SECSTR #####HHHGGGccTHHHHHHHHcHHHHHHHHHHHHHHcTTccccHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHTccHHHHHHHHHHHHHHHHHHHHHTcHHHHHTcTcc############## DISOP:02AL 1-4,114-126| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccccccccccc //