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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF09267.1
DDBJ      :             cytochrome c-type biogenesis protein CcmF
Swiss-Prot:             

Homologs  Archaea  11/68 : Bacteria  377/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
:653 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   154->292 PF01578 * Cytochrom_C_asm 1e-12 40.9 %
:HMM:PFM   89->295 PF01578 * Cytochrom_C_asm 3.6e-52 35.8 193/214  
:HMM:PFM   605->634 PF05140 * ResB 0.00056 33.3 30/467  
:BLT:SWISS 36->636 CCMF_HAEIN e-167 51.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF09267.1 GT:GENE ABF09267.1 GT:PRODUCT cytochrome c-type biogenesis protein CcmF GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 2600281..2602242 GB:FROM 2600281 GB:TO 2602242 GB:DIRECTION + GB:PRODUCT cytochrome c-type biogenesis protein CcmF GB:PROTEIN_ID ABF09267.1 GB:DB_XREF GI:93355178 InterPro:IPR002541 InterPro:IPR003567 InterPro:IPR003568 InterPro:IPR003570 LENGTH 653 SQ:AASEQ MIPEIGHLALIAALFVALAQGVLALAGAARANLTWIAFARPAARAQFLLVMVGFAALTWAFVAKDYSVAYVAQNSNSQLPLGYRMAAVWGGHEGSLLLWLLMQTGWAYAVSRLSKQLPDAMVARVLGVLGLVTAGFLLFVLLTSNPFERLFPVPQDGWDLNPLLQDIGLIFHPPLLYMGYVGFSVAFAFAIAALLAGQLDSTWARWSRPWATAAWANLTVGIALGSWWAYYELGWGGWWFWDPVENSSFIPWLVGTALIHSLAVTEKRASFKNWTVLLSIGAFSCSLLGAFLVRSGVLTSVHAFATDPRRGLFILILLTVIVGTSLALFAWRAPKVGMGGRFDMVSRESLLLVNNVLLVVTAGAVALGTLYPLLVDALGLGKLSVGPPYFNAVFVPLMIPALLLIAVGPAANWKAAQFGAIFRQLRVPMIAAPLVGLTAPFVLGHWSASAALGLMLATWIAVSVVTGIFGRMRATRGGLRAQPRSWLGMHMAHLGIAVFVTGVTIVSGYETERDVRLAQGESVSIGGYDLTLIGVRSTRGPNYVAQIGDIELSRDGKVLRRLHPEKRNYPASQMPMTEVAIDANGLRHVYAALGEPLGDGVWSVRVYHKPFVDWIWIGCILMALGGGLAISDRRYRLKPRRQHVAPPLPEAAS GT:EXON 1|1-653:0| BL:SWS:NREP 1 BL:SWS:REP 36->636|CCMF_HAEIN|e-167|51.8|595/648| TM:NTM 14 TM:REGION 5->27| TM:REGION 37->59| TM:REGION 119->141| TM:REGION 170->192| TM:REGION 211->231| TM:REGION 245->266| TM:REGION 277->299| TM:REGION 311->333| TM:REGION 354->376| TM:REGION 390->412| TM:REGION 424->446| TM:REGION 450->471| TM:REGION 487->509| TM:REGION 610->631| SEG 8->33|laliaalfvalaqgvlalagaaranl| SEG 186->196|afafaiaalla| SEG 350->370|lllvnnvllvvtagavalgtl| RP:PFM:NREP 1 RP:PFM:REP 154->292|PF01578|1e-12|40.9|137/212|Cytochrom_C_asm| HM:PFM:NREP 2 HM:PFM:REP 89->295|PF01578|3.6e-52|35.8|193/214|Cytochrom_C_asm| HM:PFM:REP 605->634|PF05140|0.00056|33.3|30/467|ResB| GO:PFM:NREP 3 GO:PFM GO:0006461|"GO:protein complex assembly"|PF01578|IPR002541| GO:PFM GO:0008535|"GO:respiratory chain complex IV assembly"|PF01578|IPR002541| GO:PFM GO:0016020|"GO:membrane"|PF01578|IPR002541| OP:NHOMO 521 OP:NHOMOORG 392 OP:PATTERN 11-1-1------------1----11------1-----------------11-1--------------- 1111----------------------------------------------------------1----------------111-----------------------11111------------------------1-11111---11-------------------------------------11111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1--------1--111111111111111111111111111111111-11111111111-111121111111111113111111112111111111111111111111111111111-11111111111111111111-11-2-----------------------111221111-11----1-1---31-----1-------121111-----2111111121-------------11-1---------------------------22-121111111122111222222222222---111-------21--2-12222222222-222222222222222222111122---323333333333333312212222--111111111111---1-----1111111-1222222222212112-------1211111111111111111111----------2222111112222211222222231111111-111111------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------1-11---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 636-654| PSIPRED ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHccccEEccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccEEEEccEEEEEEcccccccccccEEEEEEEEEEccEEEEEEEEEcEEEEccccccccHHHHcccccEEEEEEcccccccEEEEEEEEccHHHHHHHHHHHHHHHHHHHHcccHHHccccccccccccccccc //